4 genomes BUD2196 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG7330 HVO_2004 Hbo3085 - - - - HQ1785A

Pairwise sequence scores
Consensus score	2223	HVO_2004	HQ1785A	pNG7330	Hbo3085
1693	HVO_2004	2244	1408	1581	1520
1778	HQ1785A	1408	2294	1670	1617
1995	pNG7330	1581	1670	2228	1751
1897	Hbo3085	1520	1617	1751	2224

295 symbols
consensus       MEYRYTGDAHEKLFAAYRADTDPFPTNTSMEFPRREHRREEIDILKRLFFPTCWNAAELV
#oth            .2.2.2..1122.111.22.21.1.131222..21211.21112111.1..1....2211
HVO_2004        :S:T:S::::LG:A:S::::D:::::D::LS::::N:L::DV:LI:::L::R::::GPW:
HQ1785A         :::::A:::N::::E::QS::::Y:::V:VC::E:::::G::SY:QE:::::::::P::I
pNG7330         :D:C::::T:::::::::::EE::::Q:Q::::::::::P::::::::::::::::::::
Hbo3085         ::::::::::KR:::S:HD::::::KP:A::::TQRY::::V:::::::::::::::G::

consensus       RDELAVLDRLDNLGALFYAGIRPYADDDPAETVDAVLDRLPAIRTRLKKDVEAAYKGDPA
#oth            1.12121.31121.3.121..2..31311322.231223..31.22..1.1...1.....
HVO_2004        A::ELLR:GVA:F:::C:S::D::I:E::KPI::E:VR:::D::E:::::::::::::::
HQ1785A         :::::I::T::E::N::H:::C::PGVNAD:V:TN:::T::E:::L::R:A:::::::::
pNG7330         :::::::::::T::G::F::::::SGS:::::::::I:Q:::V:::::::::::F:::::
Hbo3085         ::KS::::E:::::S::::::::::::::SR::EQI:NE::K::AT::::::::::::::

consensus       AKSYMEIIRSYPGFLAIAVQRVAHALYEAGAGEYARELTEYAKTQSGIDIHPGAEIGDYF
#oth            .11.2........12.1311....32.221.31.....1.1..111........1..11.
HVO_2004        :R::V::::::::VQ::V:H:::::F:::::PA:::::A::::ME:::::::::T:::::
HQ1785A         ::::T:::::::::::V:M:::::IM:QE::V:::::::::::::T:::::::::::E::
pNG7330         ::T:::::::::::M::L::::::T::::::S::::::::::::ET::::::::::::H:
Hbo3085         ::T::::::::::::::M::::::E::KRD::::::::::F::::::::::::::::E::

consensus       FIDHGTGVVIGETATVGDWVRIYQDVTLGALHFEADEDDEHALKKGYKRHPDIGDHVVIG
#oth            .............1.1.1.1.1............31.311.3............11....
HVO_2004        :::::::::::::T:I:E:A::::::::::::::E::::::S:::::::::::::S::::
HQ1785A         :::::::::::::::::::::L::::::::::::QE:GEQ::::::::::::::A:::::
pNG7330         :::::::::::::T:::E:::L:::::::::::::::S:::R::::::::::::::::::
Hbo3085         ::::::::::::::::::::::::::::::::::K::TE::K::::::::::::::::::

consensus       AGTKVLGAISVGDHVSIGANSWVTDDVPDHTKVYITDHPTQERKRTD--------
#oth            .......111......1......11.1..1.1.1112...11..22211111111
HVO_2004        ::::::::V:::::::::::::::E::::::S:::SE:::H:::HR:::::::::
HQ1785A         :::::::PVT::::::::::::::::::::::::::N::::::::YEEGNGAQIN
pNG7330         ::::::::::::::::::::::::::I::D::::V:::::::::::N::::::::
Hbo3085         :::::::::T::::::V::::::SE::::::::LV::::::K::S::::::::::