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4 genomes BUD2205 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0130

HVO_A0244

HVO_A0392

-

Hmu3386

- - -

HQ1079A

Pairwise sequence scores
Consensus score942 rrnB0130 HVO_A0244 HQ1079A HVO_A0392 Hmu3386
313rrnB0130 525 466 163 245 225
447HVO_A0244 466 997 276 285 425
679HQ1079A 163 276 1104 476 645
644HVO_A0392 245 285 476 930 590
807Hmu3386 225 425 645 590 1389

184 symbols
consensus       ----------------------------------------E-A-E-VREGHFG-VP-S-H
#oth            111221222121222112211211222221121221222323132322112123113232
rrnB0130        ::::::::::::::::::::::::::::::::::::::::-:-:-:-------:--:-:-
HVO_A0244       :::VTDDVAYPSVELILDLHEQIVDEGDATEPGIRSEDAI:S:VQY:S::Y::E::QTL:
HQ1079A         :::::::::::::::::::::::::::::::::::::::MTT:G:H::::::DH::K:F:
HVO_A0392       ::::::::::::::::::::::::::::::::::::::::-:-:-:-------:--:-:-
Hmu3386         MTEGSDPINYLSTDDILAIHELIVESNEDTESGVSSPGDV:Y:T:DI::::::R::E:VD

consensus       EKAFQLLRLIVANHPFVDGNKRTALMSVRIFYALNGLEFAYDREIKAILKRLATDESSVD
#oth            31222111.1121....1.......11112.12..122.2.212.122.1221.2.2312
rrnB0130        ------M::L:SD::::::::::::RT:VV::I::RYT:E:GD::R:L:H:F::G:TT::
HVO_A0244       :::VH:M::L::D::::::::::::RT:VV::M:::YT:D:GD::R:L:H:F:::::A::
HQ1079A         R::::::H:::V:::::N:::::::::::S:C:::::::::N:Q::EV::T:T:N:RR--
HVO_A0392       V:T:::::::A::::::::::::::::T::::::::CR:D::::::E:::A::::::::E
Hmu3386         :::::::::::::::::::::::::::T:::::::::::::::R::D::::V::::T::E

consensus       ADTAVIYLRAHTEPLEPEY-TTIELWL-RI-DADRIP-N---DT-E--N--RPNDYD-DS
#oth            423232.1121111121213211211132132222223212322313323221.111322
rrnB0130        V::::::F::CA-------:-------:--:------:-:::--:-::-:::R:---:--
HVO_A0244       TE:::::F::CA-------:-------:--:------:-:::--:-::-:::R:---:--
HQ1079A         ERNRFS:::E:::::::K:K:::::::TQ:M::E::SN:IGPG:S:SQ:RNE:::::S::
HVO_A0392       ::DVIT:::::::::A:::EA::N:::A::EGT:QL:TE::H::V:QDTY:E:::::D:A
Hmu3386         KEVVLS::DD:::::::::R:::::::S::A::::::E:IVS:PP:GE:HSK:::::AE:

consensus       RS-E
#oth            2232
rrnB0130        --:-
HVO_A0244       --:-
HQ1079A         :DSN
HVO_A0392       H:G:
Hmu3386         ::E: