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4 genomes BUD2206 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0070

HVO_B0357

-

Hmu1431

- - -

HQ1919A

Pairwise sequence scores
Consensus score4435 HQ1919A rrnB0070 HVO_B0357 Hmu1431
2920HQ1919A 4627 2171 2154 1894
2996rrnB0070 2171 4588 2210 1987
3172HVO_B0357 2154 2210 4677 2084
2736Hmu1431 1894 1987 2084 4001

651 symbols
consensus       ---HRRSNTRSDRALLHTLTFVVAFCSFAYELVYSELLTVMFGGTVTQYGITIGLFFFSL
#oth            122332232122322.121.12.11..12..1211.111.21..1.11.21.1.1111..
HQ1919A         :::MK:LI:P:AQTS:::I::L::::::T:::A::::::::Y::::::::L:::I::S::
rrnB0070        :MTP:PHHP:HSVP:::A:::I::L::::::::FA::Y::V:::S:::::L::::::S::
HVO_B0357       :::--M::::T:T:T:L::::::S:::::::F:::::::::Y:::::::V::V::Y::::
Hmu1431         VLS:F::SL:::::::LG::L::::::IV:::I:::M:R:L:::::LR:S:::::YL:::

consensus       GIGAFLSNRLDGEA-EENFFRTEVLLAVVAPLGLLLIILLNS---VRIPQAAPAELVGAA
#oth            .1.12123322223123.1..2.21..221.2.1.2212111111213.12222311223
HQ1919A         :::SYIAKQF:ETR:P::V::::LY::FI::V:::F::WI:T:::AAL::LL:EI:L:LL
rrnB0070        :L:S:::G::ETDP::S::::V:TY::::::::F::V:::GT:::L:Y:-::Y:P::::I
HVO_B0357       ::::A::DD::::TLGG::::::::::AA::A:F:::VG::::::::::::V:::::WTV
Hmu1431         ::::::Y:YV-:::::T::::I:::::::G:::::VM:::::VPD::F:--:KDTA:L::

consensus       ARLPIVAIGFLSGFELPLLTALVNSLD-----PPSI--GVRRATNRINRAINAAIGALFH
#oth            11..1131.1...1.1.1.23123222222223213221212323333233333313223
HQ1919A         ::::V:G::V:::::::::L::::N:::::::S::LSP::::I::MTD:V::TI::I:::
rrnB0070        ::::::T:::::::::::::T:SE:VRDTARP:S::AR::::L:SHL:::FGVVL::A:S
HVO_B0357       ::::V:VV::::::::::::RMFDD::GDGSAT::W::-L:T:GT::HDFVV::V:T:WT
Hmu1431         SH:::I:V:V:::L:I:F:SSM:T:--:::::----::----------------------

consensus       IERREG-------ERSAYSAVLAMDYLGGLVGALVYAFFLYPSVGLIPSIFVLALLNGVA
#oth            33232211111111212213..12..2.1.21211.122...22...22111.111.2..
HQ1919A         TSHSRS::::::::YDT::T::::::::::IS::I:V:L::::::::I:::A:::I:V::
rrnB0070        :K::::KPSDPAD:T:::A:::GF::::::::S:::V:::::A::::::V::::F:::::
HVO_B0357       V::T:::::::::R::GL:V::::::V:::A::V:::RV:::GI::::T:::::::::::
Hmu1431         ------:::::::::::F:E::GV::F:S:::TV:::L:::::M:::TA:V::G:::A::

consensus       ALIFAARFAARSWGILAERDADAIANTG----------------------KALLVVCLLL
#oth            ..3.232133322331333333333322111111111111111111111112.2212111
HQ1919A         ::F:IC::SS:P::::::G:R:I:T:ER::::::::::::::::::::::TV:V:ITIV:
rrnB0070        :::::STT:NTHRPT:RS:LPQPVGS:::::::::::::::::::::::::::FA::::V
HVO_B0357       ::V:V:H:G:W::WP:GGDE:S:S:G::GNAAASARTDGSDRSLSAARVS:T::::::::
Hmu1431         ::S::V::TES:----------------::::::::::::::::::::::::::L:G:::

consensus       TATYAGAVANHRAVDERLSELYLEGAIENEYPPGAADAAVTDQETTRYQHVVRYNRTWTG
#oth            .11211222223312231121.2.231.3..1..132231.323..2..2123.2.1111
HQ1919A         :::LG:::IS:QT::NT:T:Y::::N::Q:::::TV::EI:T:F::Q:::::Q:::::K:
rrnB0070        ::STGA:AV:AGP:G:DV::Y:F:REF:L::A:::M:V::::TW:::::R:TE:::::::
HVO_B0357       ::::::V::K:D:A:::::Q::::QQ:::::::::IR:T::S::::A::::I::D:::::
Hmu1431         :G::::IL::E:Q:EDS:TD::V:::::S:::::T:SID::ERH:::::DA:L:E:QL:-

consensus       SGDNPDFAGRTERCLRLDAAVQLCDSWADPYHEGLVDVPLSMFENGTDTKVLLIGGGDWI
#oth            2231131313.12....13.1.1.111121..2......1.2221221.2..11.....1
HQ1919A         :SS::L:::Q::::::::T:I:V:::T:R:::N:::::::::YP:T:::D:::V::::::
rrnB0070        :::::Y:GAT::H:::::S:::::E::::S::Q::::::::::::S:::::::::::::A
HVO_B0357       T:P::H:D:::::::::G::::::E::::S:::::::::M:LVDP:P:::::VV::::::
Hmu1431         -----:LP:-:DT:::::M::::::R:VE::::::::::M:Q::::SE:R::::::::::

consensus       AVDHLREYGVSVDHVDIDGEFMQYAKTDPFLAQYHDDAYEYDRLNTRVADAYRYLQRTDA
#oth            .2.1.1221.1.....1.1...2211121.1221.12..2.2223.311.223..23123
HQ1919A         :L::::QGN:::::::::A::::::::NS::TE::NN::T:EHAK:YQ::I:D:::::::
rrnB0070        :M:R:QRH:::::::::::::::R::::::::::::G::R:QNKS:::Q::FQ::EQSEQ
HVO_B0357       ::::::::::T:::::L:::::RD::::::F:RW::::::::::::T:::G:::::K:NE
Hmu1431         ::::::::::T:::::::::::N:TRDH::FE::::::::::::T:H::::RT::RS::R

consensus       QYDLILLDIPGATDDDLLPLYSTEFYRQLRQHLTEDGVVATWGYSRYAYANHHKAYANTV
#oth            2..11...1...22..2.11..11..2211211121.121..2..223133.22.13...
HQ1919A         :::V::::L:::KT:::::V:::Q:::L:KDS:::N:::::::::Q:T:SS:Q:::F:::
rrnB0070        R::V::::::::::::Q:::::V:::S:::::::A:::I:::T::::S::Q:RT::Y:::
HVO_B0357       T:::V:::::::::::::T::::::::SV:T::S::::AV:::::PD::PE::::FV:::
Hmu1431         ::::::::L:::RS::A:::::::::T:::::V:D::M::::V:::HRFT:::M::::::

consensus       RAAGFTRYASYFAYDDIDADGETERGERFYLLAP-SPRPRLTPDNA-TAYVRRYQEAYQA
#oth            33..113222.3221.3131.121.1.2.1111.12212311222111212222133.22
HQ1919A         TQ::::Q:Q::Y::::YTGN::IR:::L:::F::D:S::VI::T:G::Q:::K::GQ::S
rrnB0070        HK::L:SA:P:::WE::::::::::V:::T:::::A::DS:S:H:G::::MN:::HR:::
HVO_B0357       G::::::EL::WVRE:L:D::::::V:Q::V::::GD:::::G:G:::R:::ARE:H:G:
Hmu1431         :E:::RG::D:ST:::F:R::QL:::::::::S::::NEE::L:T:RN:RTE:V:S::ER

consensus       VEWRAVPRYRGVRPNSIFHPNYDILIDT-----------------------
#oth            21.22212.1..11.12.2...1.112111111111111111111111111
HQ1919A         KK::S::T:::::::TL:N:::E:::::QRKQESASNRLSRLQNMTLSDLL
rrnB0070        :::VDT:::A::::::V:::::::::K-:::::::::::::::::::::::
HVO_B0357       :::H:::H:::::E:::::::::::V:::::::::::::::::::::::::
Hmu1431         R::::ID:::::E:::::D:::::V:G-:::::::::::::::::::::::