4 genomes BUD2210 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1955 - Hbo3506 Hmu1290 - - - HQ2675A

Pairwise sequence scores
Consensus score	3102	HQ2675A	Hbo3506	rrnAC1955	Hmu1290
2328	HQ2675A	3178	1992	2140	1977
2423	Hbo3506	1992	3078	2181	2057
2699	rrnAC1955	2140	2181	3091	2326
2591	Hmu1290	1977	2057	2326	3091

417 symbols
consensus       MAIDTDVLVIGGGATGAGIARDLALRGVDVTLVERGGLASGTSGRSHGLLHSGARYAEAD
#oth            .123.1.211......1.11.......1..1.2..1..32.............1....1.
HQ2675A         :T:Q:::AI:::::::::::::::::::::S:F:::::GG:::::::::::::G::::S:
Hbo3506         ::D::::V:::::::::::V::::::::::::::::::SA::::::::::::::::::::
rrnAC1955       :::E:::::V::::::::V::::::::I:::::::D::T:::::::::::::::::::::
Hmu1290         :TRS:T::::::::::V:::::::::::::::A:::::::::::::::::::::::::::

consensus       PVGAEECIAENRILRDIAGACIRDTGGLFVQLAADDPDYFEAKRAACEEIGIPTETLDAD
#oth            22..1...3.1...12..12.1.1.....1..23...2...3.12..1111.12.11112
HQ2675A         :I::::::R:S:::::::EG:::E::::::::ES:::A:::E:LE::N:LD:::::IS:E
Hbo3506         E:::R::::::::::::::E:V:::::::L:::E:::E::::::T:::D::::I:::SG:
rrnAC1955       R:::::::T:::::KE:::::::::::::::::G:::::::T:::::::::::V::::::
Hmu1290         :T::::::E::::::S::::::::::::::::P::::::::R:::::::L::D::L:::T

consensus       EARERVPDLSEAVERAFRVPDAVIYPSRLVAANAADARDHGASIHPNAPVEDVTVEDGRI
#oth            11122111.211....13...1.11.....1......111..1.2111.1.112111.21
HQ2675A         ::H::::G:T:D:::::T:::G::::::::V:::::::E:::::YTHT:::S::TAN:E:
Hbo3506         :V:NEISG::::::::MK:::::VS:::::::::::::::::T:LT::::::LH::::::
rrnAC1955       A::::::::ASD:::::E::::::::::::::::::::::::T:::H::::::L::::HV
Hmu1290         :::DL::::::::::::::::::::::::::::::::A:Q:::::::::L:S:::::::V

consensus       TGVHVGGTVNDTIEADQVVNAAGAWAEEVAAMAGLDVEMQPTRGVMVSVEYDGLGPVLNR
#oth            12221..2131.111212...1....1221211111.2.2.11...11.2..2111....
HQ2675A         :EL::::EI:::V::T:I:::T:::::VMGEDL:V::S::::::::I:::::::D:::::
Hbo3506         :::K:::S:GE::A:K:::::::::::D:GR:::VE:A:R::K::::::Q::::::::::
rrnAC1955       A::Q:::::E::::::Y::::T::::G:F::::D::::::::::::::::::D:::::::
Hmu1290         :SA:L::::SE:::P:YL::::::::G::::::::::::A:S:::::A:D::RV:S::::

consensus       CRDPDDGDIVVPHDGEAVLGTTSVPVRDPDDYEEADWEVERSIEECAAMLPPVADAEEVR
#oth            1...1....1...1211......1213...1.12221...2211..1311.2221.121.
HQ2675A         :::::::::I::::::V:::::::A:E:::::::::::::::VD:::ELI:DIT::P:::
Hbo3506         A:::A:::::::::::V::::::IE:D:::::P:DAQ::::MV:::SK::::ARE::R::
rrnAC1955       :::::::::::::ES:::::::::::::::E::TEQ::::E::::::::::S::::P:::
Hmu1290         :::::::::::::ERQ:::::::::AS::::::R::::::TC:::::T:::::::::IE:

consensus       TWWGVRPLYAPDEAERE-GRGISRGFFRLDHAD-DGVENAASIVGGKLTTYRQMAEATTD
#oth            .........1...111222.......1321.1111112.33.1..............12.
HQ2675A         :::::::::E:::D::DD:::::::::VIN::ERNEPA:LI:V::::::::::::::AS:
Hbo3506         :::::::::::::DS::GA::::::::CV::G:::::::FT:::::::::::::::::::
rrnAC1955       ::::::::::::::::-::::::::::L:::::::::D:M::::::::::::::::::A:
Hmu1290         :::::::::::::::S::R:::::::L:::::E:::::::V:V:::::::::::::::::

consensus       LVCDRLGVDADCRTAERPLPGADDPAQLDALVAEFDGQGPTDEDVVASA--------
#oth            22.22...212.2.1232.122...21..12121.1121...2.1.32211111111
HQ2675A         QI:A::::::S:E:D::::HAS:::::::::ID:::AVN:::R:I:TT:TPAESAAD
Hbo3506         R::EK:::A::::::AKR:::::::E::::Y:T::G:A::::::::RG-::::::::
rrnAC1955       ::::D:::::A::::DQT::SV::::::::::::::::::::::::G::::::::::
Hmu1290         :L::::::TT::T:::E::::::::GT::EF::R::::::::S:::::R::::::::