4 genomes BUD2212 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1994 - Hbo0898 Hmu0303 - - - HQ1141A

Pairwise sequence scores
Consensus score	799	HQ1141A	Hbo0898	rrnAC1994	Hmu0303
454	HQ1141A	679	297	368	357
486	Hbo0898	297	793	408	445
594	rrnAC1994	368	408	811	492
606	Hmu0303	357	445	492	792

111 symbols
consensus       MGDEDEIDDEDVSVSMEISGRYDEVMSKLAIEEERADALAPLLADLEALLETVERMDGGT
#oth            133132332121211.111.3.21.2.1.332231313131.23.2.31.11121111..
HQ1141A         ---------------:SL::E:N::::::R:DTTG::I:E:::::A::V::A::QL::::
Hbo0898         :SE:T:P:A:::Q:::::T:S::D:L:R:SPV:K:R:GIDS:IQ:V:IV:::L:::GE::
rrnAC1994       ::::ED:E::A:::::::::N:::::::::T:D:GSTS:VS::D:::Q::D::V::::::
Hmu0303         -MS:::ST::::::::::T:::E::V:::KS::S:P::::::AS:::T:::::Q::G:::

consensus       RSAIADQLPGDMTASDDAAAVVELLQVLERYDLVVLEGNTWKPGPRL--RE
#oth            ..11.32.12122223..3...2111..1..1..1.1......1211113.
HQ1141A         ::VV:E::TDESSL::::D:::T::::::::E::H:D:::::::A::::::
Hbo0898         :::::KN::::T::EL::E::::::H::K::::::::::::::RQ:-::N:
rrnAC1994       :::::Q:::E:::V:F::Q:::DT:::::::::::::::::::::K:TTE:
Hmu0303         ::::::E:::E:A:DY:::::::TM::::::::::::::::::::::::G: