4 genomes BUD2219 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - - HVO_0088 Hbo1408 Hmu2937 - - - HQ3442A

Pairwise sequence scores
Consensus score	1303	Hmu2937	HVO_0088	Hbo1408	HQ3442A
889	Hmu2937	1605	400	683	633
517	HVO_0088	400	767	456	405
1081	Hbo1408	683	456	1530	942
980	HQ3442A	633	405	942	1302

220 symbols
consensus       -----------P-------------L-----S-MLQAPAQVAQM---PDQLAALLASEWA
#oth            11111222222122222222222221222221233322122122111122.321.31221
Hmu2937         :::::MASLAF:ARSRLRTWAEEYG:LAIAL:FVVL:G:G::LFVVGDE:::RE:IQRYG
HVO_0088        :::::::::::-:::::::::::::-:::::-:---MS:FT::L:::::F:RE::::DL:
Hbo1408         VKNRIAPGDGL:DNGMSSILGAKLV:MIRGY:RSM:::L::::::::::E:Q:::H::::
HQ3442A         :::::::::::-:::::::::::::-:::::-:::VF:L:LES:::::P::V:::E::::

consensus       LAALFGIFVLEGAMLLYFAPSELIVPGALVLLGTD-------AAVAIIGVAVLGATIGQY
#oth            131.121.1......1.11...21..111211122111111113211221..2...2..2
Hmu2937         ::::LV::::::::::::::::VL::A:IGA:A:TDGGYDWG:I:::FV:::V:::A::T
HVO_0088        :V:::FV::::::::::V:::::L:::::::V:ER:::::::LLLP:LA:::::::V::V
Hbo1408         YLV:::V::::::::M::M::::::::S::::::::::::::::::V::I::::::::::
HQ3442A         YI::::::I::::::M::M:::F::::S:L:::D:::::::::VIP::::::A:::::::

consensus       ALFKLAQRGGREYLLQKPWFRVSESKLDRFDGWFERWGPAAVPVSNALLFTRGMLTVPAG
#oth            3..21.11....1..112..111111.1....1121112332121121111111111111
Hmu2937         T::V::::::::W:::::::::::::::::::::D:::H:::::::::::::::::::::
HVO_0088        G::LV:K::::::::SR:::::::DS::::::----------------------------
Hbo1408         ::::V::::::::::::R::A::::::::::::::::::IV:::::T:::::::::::::
HQ3442A         V::::::H:::::::::S:::IKP:::E:::::::::::FII:L::::::::::::::::

consensus       FAEMRDRQFAALSAVGTLVFECALAALFLYLNRLG-----
#oth            2111321213211121122113311322323332311111
Hmu2937         V::::V:R:::::::::::::TW::VS:Y:::EA:LLWFL
HVO_0088        -----------------------------------:::::
Hbo1408         ::::D::::V::::::::S::VI::::YV:FDT:V:::::
HQ3442A         ::::N::::IT:::I::V:::::::G:::LSG::L:::::