4 genomes BUD2233 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0038 rrnB0124 - - - - hla2602 - HQ2982A

Pairwise sequence scores
Consensus score	664	VNG0038	HQ2982A	rrnB0124	hla2602
410	VNG0038	674	337	363	352
441	HQ2982A	337	670	386	404
557	rrnB0124	363	386	656	505
563	hla2602	352	404	505	980

127 symbols
consensus       -------------------------------------------MARRDFSGRDVVKALVN
#oth            111111111111111111111111111111111111111111112223...11.1.11..
VNG0038         ::::::::::::::::::::::::::::::::::::::::::::SYSP:::::::::M::
HQ2982A         ::::::::::::::::::::::::::::::::::::::::::::VT:::::YE:A:::::
rrnB0124        ::::::::::::::::::::::::::::::::::::::::::::::GK::::::::V:::
hla2602         MRLSRSTGERSVANRPTKSFGNSGSIPRRTRPETRSRPTFSNSV:::T::::E:::V:::

consensus       RGGFEWRRTAGDHAQLYWEHP-TNESDRRHVTVPLHDELREGTLRNIAEDAGARDFAAFC
#oth            3.211.2..3....2.2121.2231221.2.11....1113...13.1121.13..32.1
VNG0038         S:IY::D::N::::I:V:NP:ESHD:P::T:P::::::::::::KE:G:Q::MQ::QE:K
HQ2982A         K:N:Q:V::P::::V:K::::DGP:VKK:S::I::::RV:V::::G:::::::K::EK::
rrnB0124        V::::::::T:::::::YQ::::::::::::::::::::KT::::S::D::::N::::::
hla2602         :::::::::::::::::Y:::::Y:E:K::::::::::V:K::::::::SG:::::D:::

consensus       AWIDRNS
#oth            1.1...1
VNG0038         :::::::
HQ2982A         E:::::R
rrnB0124        E:L::::
hla2602         :::::::