|
Pairwise sequence scores | ||||||
---|---|---|---|---|---|---|
Consensus score | 1640 | HVO_A0051 | hla2200 | HVO_A0054 | pNG6146 | HQ2123A |
753 | HVO_A0051 | 1037 | 802 | 382 | 488 | 471 |
751 | hla2200 | 802 | 1034 | 398 | 514 | 463 |
1006 | HVO_A0054 | 382 | 398 | 1538 | 960 | 804 |
1365 | pNG6146 | 488 | 514 | 960 | 1784 | 1181 |
1237 | HQ2123A | 471 | 463 | 804 | 1181 | 1600 |
228 symbols consensus -----MSGISDP---EQSR-S-DDDVAYVGYRRRGRAVVLNQPEQERLTPDRSLELVNHS #oth 1111122221223332222323143241213.221221.32221222.1.1.112.121. HVO_A0051 ::::::::::::QPI::::P:D:S::V::::::::::I:EK::D::Q:::E:T:::A::: hla2200 ::::::::::::CSHV:::T:A:P::I::::::::::I:K::SD::Q:::E:::A:AS:: HVO_A0054 :::::-------:::----:-:--------M:VDD:P::::LT:H:::A::::::::RQ: pNG6146 MNGNARRTT:NVVQT:ALANRR::S:E:::F:ID:Q:::::LS:HQ::::::::D::::: HQ2123A :::::-------:::----:-:-MTT::I:R::Q:EL::TRR::DTE::::::F:::::: consensus PSGFEWGYAGSGPAQLACALLLDYTDDEQVAREHYIAFRNRVVSQLECDGPAGCWHLTGE #oth 12.111.13...1....11.....11.131.221.22.124.1.....22113..1.1.3 HVO_A0051 ::::S::::::::::::L::::::::::D::L:E:ME:KTK:::::::TE:D:::R:::R hla2200 ::::::::G::::::::L::::::::::E::LAE:K::KTE:::::::T::D:::R:::Y HVO_A0054 RP:::::DT:::S:::::G:::::::::A::SQ:::Q::DD:::::::S:::N::::::D pNG6146 :T:Y::::::::::::::G:::::YN:A::::::::::::::I:::::::::A::::::: HQ2123A :::::V::R:::::::::::::::Y::::F::::::::::Q::::::::SA:V::::P:: consensus EIDAALAEITDDPVALPDGG-PSPSLPENWRTV-RPDRRVFQRADRDHYIVLGEGTDEWL #oth 1.111113312221122111312.121211221312212111121211121112112211 HVO_A0051 :::T::R:TVGE:::-----:--::VN------:-------------------------- hla2200 ::::T:R::V:::::-----:--::IN------:-------------------------- HVO_A0054 D:E::::GV:KHEALT::::T:T::::V::SA:N:SE:T::::R:I:::V::::::E::: pNG6146 :::::M:T::::V:::::::G::::::::::::T:::::::::::::::::::::::G:: HQ2123A :::::M:AL:::V:::A:::R:::T::::::::S:::::::::::::::::::D:::::: consensus -VLCSQGDRAYPAPLA-RTV--DADV--AVRELV-ESNDLIEPPEGE- #oth 321221111111111231113322123322221231111121121222 HVO_A0051 :---------------:---::----::------:------------: hla2200 :---------------:---::----::------:------------: HVO_A0054 LL::A::::::::::DI:::PIEE:PAP::::::V:::::V::E:DV: pNG6146 A:::::::::::::::S:::SG::::DR:::A::D::::::::::::C HQ2123A V::R::::::::::::H:::AE::::EQVIQ::AE::::::::::::H