| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 1828 | hla0308 | HVO_B0221 | rrnAC3127 | HVO_0903 | HQ1615A |
| 991 | hla0308 | 1757 | 880 | 883 | 924 | 881 |
| 1168 | HVO_B0221 | 880 | 1841 | 1026 | 1058 | 1015 |
| 1473 | rrnAC3127 | 883 | 1026 | 1844 | 1355 | 1305 |
| 1628 | HVO_0903 | 924 | 1058 | 1355 | 1821 | 1494 |
| 1568 | HQ1615A | 881 | 1015 | 1305 | 1494 | 1987 |
277 symbols consensus -----------------------MSLLDLDNINAYYGESHILRDLSMSVDEGEICALLGR #oth 11111111111111111111111121.2212122..12..11212.23131..121.... hla0308 ::::::::::::::::::::::::TI::V::::T:::N::V:HGI:LEIN:::VVT:::: HVO_B0221 :::::::::::::::::::::::::::E::GVH::::P:::::GV:FDI::::VVT:::: rrnAC3127 ::::::::::::::::::::::::T:::V::::G:::::::IQ:V:::::D:::T::::: HVO_0903 :::::::::::::::::::::::::::EI:A:D::::::::I:::::::E:::::::::: HQ1615A MSTLEDDETTGESSTTTHGGESSRE::R:NGVDG::D::::::::::K:K:::::::::: consensus NGAGKTTTLRSIAGATPPAVRSGSIRFDGDDITGVPAEDIAVRGISLVPEERRIFPNLTV #oth ......1.2.1.2.12..42.2.2.312131112321121232..11...2..2.13.1. hla0308 ::::::::M:::V::S::--:T:::TYR:EE:S:LSPDE:NEL:::::::D::V::T::: HVO_B0221 ::::::::V:::::TE:::I:::::::::::::DW::DN::MG::GV:::G::L:TE::: rrnAC3127 ::::::S:::C:S:::::D::::A:Q:::T:::NA:P::::::::::::::::V:TD::: HVO_0903 ::::::::::C:::::::E::E:T:::KD::::::::::VS:::::::::::::::::S: HQ1615A ::::::::::::::::::T::::::S:::N:V:::T:::VSI::::::::::::::::S: consensus AENLHLAEVVRNKSNTWRR-DLNFGDEGMSTDEVYDQFPRLDERRSQQAGTLSGGEQQML #oth 2...2113322232113211424324321232.3.12..1..11.313111........1 hla0308 H:::R::H-----------:--:LASDPRPVE:M:EL::A::PL:KNDGQN::::::::V HVO_B0221 E:::EMSKIT:GWW::I::GG:GG:EST::I::L::L::::::::T:::::::::::::: rrnAC3127 :::::::DT:::::::::::K:D:R:::::AA:I:EY::::::::::K:::::::::::: HVO_0903 ::::::::::N:::::FG::S:S::HK::::E:::::::::::::D:R:::::::::::: HQ1615A ::::::::::N:T::::G:::VEA:G:::T:::::::::::::::::::::::::::::: consensus AIARALK-QNTDLLLLDEPYEGLAPQIIEDVEDAIERISDAGTTILLVEQNAAAAIKLAD #oth 11..1.311221111....1.....2.1221222122131412.1..2...132.331.1 hla0308 SV::::V::AP:V::::::T:::::V:VD:LREIVQTVV:ENV:V::T:::VDF:FD::E HVO_B0221 S:::T:RLP:LK:::::::T:::::::VKA:G:S:TE:A:Q:L:V::I:::VRE:LRI:: rrnAC3127 ::::::H::S::::M::::::::::::::S::N::::::ED:::::::::::V::M:I:: HVO_0903 :::::::::::::::::::::::::K::::::::V::::::::::::::::::::::::: HQ1615A :::::::::::::M::::::::::::::::::::::::NET:::::::::::::::N::: consensus RAYVIDQGQIVFDGTAEELRDDDETRERYLGV----- #oth .2.12.3.21.12.112.1222222113..2.11111 hla0308 :G:IM:T::::::::V::I::R:DLL:T::S:GTADA HVO_B0221 :G::L:::D::YG::VD::ESE:--LDE::V:::::: rrnAC3127 :C::L:R::V::E:P::::QN:Q:::DK::::::::: HVO_0903 ::::::::G:::::::::::::::::::::::::::: HQ1615A ::::::H:::::::::A:::S:E::::::::::::::