|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 2758 | rrnAC1893 | HQ2062A | HVO_2360 | hla1552 |
1734 | rrnAC1893 | 2770 | 831 | 1256 | 1130 |
1127 | HQ2062A | 831 | 1957 | 837 | 853 |
2051 | HVO_2360 | 1256 | 837 | 2704 | 1625 |
1977 | hla1552 | 1130 | 853 | 1625 | 2911 |
381 symbols consensus ----------------MPAV--FTTPPPLDAGDRVAVVAPSRPADESA---LDRGRERLR #oth 111111111111111121222212211123322221211122232223111233232122 rrnAC1893 ::::::::::::::::::::TD:L::::VEP:::::::::ASN:P:::RFIYEL:L::M: HQ2062A ::::::::::::::::----::--------------------------:::--------- HVO_2360 ::::::::::::::::::::::::P::::::::::::::::::I:::Q::::::ACA::: hla1552 MSVGTKHADGLSGCLTQ:VSMA:::::::GDDQAL:I::::::P:ATK::::QI:::::A consensus DVFDLDPVVFPTARADPEWLADNPAARAEDIMDAFADPDISAVIANIGGDDQIRILPHLD #oth 312322222111133.2121312.11..21122..3..2121.2.31..2..112.21.. rrnAC1893 E:::::::AY:::T::::::::::E::::E::K::R:::::::::::::H:::TM::F:: HQ2062A --------MY::VKK:::Y:F:H:EE::R:VH:::Q:::V:::F:T:::A::::::K::: HVO_2360 :::S::::::ES::R:W:::R:::::::::V:T::E::S:RG:::VT:::::L::::::: hla1552 G-LGVETR:::::DP:RD-EPAS:::::A::E::::::E:G::M:YT:::::::V:R::: consensus GDRLRASPTRFFGYSDNDNLALFLWNHGIVSYYGGTLHPDLACDGELHDYTERYLRRALF #oth 122.212....1.2...21.111..22.1...1.222122223122223.111.....1. rrnAC1893 ::V::EH::::Y:::::T:::::::::::::::::STLLEY:M:::MF:::KE::::::: HQ2062A PE:::EN::::::T:::AC::SY::GC::::::::::LS:V:TP:S:PE::::::::::: HVO_2360 PA::T::::::::F::::::R::::T::V:::-:A::::T:TV:P:I:P:V:::::::F: hla1552 ::A:A:::::::::::::::R:::::R:::::-:LGV::::V::AD::T::::::::::: consensus EESLGRIEPADEWTDE--DWF--DFEA-REPREWEDNPGRT-WRGPE---AERVRGRLWG #oth 121113321.211..1221.211.21313111122221.121.2121111313.3..2.. rrnAC1893 :D:V:EWTE:EVF:::SGN:E:::P:SVKTT::I:HSD::L::::G-:::E:T:S::I:: HQ2062A D:T:RTP:::::::::PI::AND:Y:H:T::-TF:T::::Q::HT:::::GTV:E::::: HVO_2360 :R:::VV:::S::::-:::::::::DT:E:::::R::::::::::--:::D:::T::::: hla1552 :::::::V:::::::-::::::::::::::::::D:T::P:M:V:::GDS::P::::V:: consensus GCFAVLKWHLQTDRYLPAPDALDGAVLALETSEDVPDPREVGYTLRALGERGLLERFDGV #oth .222112221221.11.3.2211.2...1....22.3122.1221121.....1111111 rrnAC1893 ::Y:::VEQFLA:::::D:E::N:T::::::::LI:::AV::AN:::::::::::::::: HQ2062A ::LT::QAL:AG::AV:S:T:I::D:::I::::EL:SADK::LMMSC::::::------- HVO_2360 :N:S:V::::::R::::N::E:::::::::::::::L::::R::::SM:::::::::::: hla1552 :T::IV::::::::::::::R:::::::::::::::P::::::::::M:::::::::::: consensus LVGR----PRTNAPPLEWRP-P-EYRARLRAEIARELDAYNPDAHAVFNCEFGHTDPTCP #oth 21111111211332221.32112213232233333313313.11312133211112.221 rrnAC1893 ::::ACARSHAEEN:Q:::E:-::::E:Q:DT::DI:KT:::N:PV:::::::::Y:::: HQ2062A ----::::-::VRCSVD:ST:-:------------------::L::-------R:R:G:E HVO_2360 V::::::::::YS:E:::E:::AD:G:Q::::LLSV::::S:::T:::DV::::A:::V: hla1552 ::::::::::::::::::D:D:D::P:E:ENVVT:::GR:V:::V:G:GYD::::::SF: consensus IPLGAEATLDPAEKALRF--D #oth 1.2123222212323212112 rrnAC1893 ::I:G:VEIE::T:SI::::P HQ2062A ::----------------::- HVO_2360 L::::K::::::VER::I::: hla1552 L::::V:::::E::::::GP: