| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||
|---|---|---|---|---|---|
| Consensus score | 4148 | HQ3157A | hla1042 | HVO_1939 | Hbo1809 |
| 2454 | HQ3157A | 4404 | 1833 | 1881 | 2035 |
| 2852 | hla1042 | 1833 | 4321 | 2258 | 2208 |
| 3212 | HVO_1939 | 1881 | 2258 | 4201 | 2624 |
| 3172 | Hbo1809 | 2035 | 2208 | 2624 | 4361 |
625 symbols consensus MTNE----G----TDRRIRRLDPETVAAIAAGEVITRPADVVVELIENALDAGADRVEIA #oth 22321111122222332121..2112231..1..11..121.2..11.....1.311113 HQ3157A :S:Q:::::DTESSKTT:C:::D:MI::V::A::::::::::A:::::::::::::ID:S hla1042 ::G:ERTA:GGAG:PD:V:::::A::DR::::::V::::R::G:::D:::::::S:::V: HVO_1939 ----::::-::::---M:H::::::RSK::::::VA:::S::::::::::::::ET:::D Hbo1809 V:T:::::-::::::::V:K::E::::S::::::::::E:A::::V::::::E:T:::VT consensus VDGDGTDRIRVRDNGRGMSEADAALAVERHTTSKLAA-------G--T----AGDLQTVE #oth .3.....211.2.1.1..123..2...1..1...122112222212212222121232.2 HQ3157A :T:::::QLV:::::Q:::KQ::I:::Q::::::IN:::TKQAA:EI:PTTQD:IIPP:: hla1042 :E:::::::::D:D:::::RE::R::::::A:::::P:::::::-::-::::D::PVG:G HVO_1939 :::::::::::A:D::::A:::::::::::::::::::::::::-::-:::::D::E::: Hbo1809 :V:::::LL:::::::::::T::::::::::::::GDVAEGTSE:HR:SSGD:A:::::S consensus TLGFRGEALASI-AAAARLELVTNDGGPRGTRVVV-GG----NGEDAKAVEPAGRARGTT #oth 1........11.1.2111..12.11.212..111111122223222323.312...1... HQ3157A ::::::::::::::TVGT::IE::N:::C::MIKT:--::::::PT:ES:::T:::C::: hla1042 S:::::::::A:::E::::::::S::D:V:::::::::AASDLDS:GP::TD:::::::: HVO_1939 :::::::::P::A::::::::T::::S::::::::D::ENAPG::RD:T:S::::::::: Hbo1809 :::::::::P::::::GT:::::::::T::::::::--::::-A::E:H:K:I::::::: consensus VDVRDLFAARPARRESLASSAAEFARVSALVSRYALTRPDVAFSLRHD---------GRE #oth 13.32..132...121..1.3.....1.32.22...22.21112.3.1111111111.22 HQ3157A IT:NN::E:V:::Q:A::::Q:::::I:K:::H:::LH:MT:I::Q::::::::::::ND hla1042 :V:E::::T:::::::::G:::::::::S::AD:::AN:G:::T:D::::::::::::SR HVO_1939 :::TG:::D:::::K:::::K::::::::V:T:::::::::R:V:::::::::::::::: Hbo1809 :E::::::EI::::Q:::::R:::::::DA:::::::::::::::V:ETGGESPDGG::: consensus TLSTPGSG-YADALLGVYDRDAASRSSTIEAAREIEAAG--------ETATVEVAGALAH #oth 111.1.212212.1.1..2.13.22111121321123312112222221211113.2.21 HQ3157A V:::S:D:::TS::::::N:EI:AQ:T:::STQT:DIDTK::SSQITQ:::I:IN:V:V: hla1042 :::::::::ITE::::::::ET::::TE:A:SV:::RE:GGVGGDGAASTA::::::::Y HVO_1939 ::T:::TDRF:::::A::G:::::HA::FD::::V:::::::::::::::::::D:::C: Hbo1809 VF::S:::D::::I:::::::V:G::::F:SE:::TDN:::::::::::V::S:E:L::: consensus PSVTRSRRDHVRVAVNGRAVANERLRAAVAAGYGDLLPDGREPVAVVRVSLPPAWVDHNV #oth .2...12.11132111..123222.21.132..121..1.12.1121311.11222.1.. HQ3157A :T:::AN:NA:SI:ID::P:N::T:M::IMN::S::::G:QH:I:A:T::::GSLT:::: hla1042 ::::::S::::::S::::P:R:D::A:::R::::R::::::::::TID:::Q::R::P:: HVO_1939 :E:::::::::H:S:::::L:EP:::R:::D:::T:::::::::G:::LR:::::::::: Hbo1809 ::::::::::IYT::::::FPS:P::R::V:::::V:::::A:::::S:::::P:C:::: consensus HPAKREVRLRDADAVADAVEASVADALSTADLRRSAEVAMDLDSSLEPVDGAE----AAF #oth ..1.21.121211111221132.3...111.1.12321212..22.11132122222131 HQ3157A ::R:QT::IQT::LI::MI:T::S:::::V:Q:QIDTLSTE::V:::ALTD:DQTSS::V hla1042 :::::::G::::::::::::SV:::::TG:::::K:::ETG::GA::::G:E:GERL:T: HVO_1939 ::::D::GF:::::::E::::::R:::::::::::G::::::::::A::EA:-::::SV: Hbo1809 ::::::::::AQR::ERT:REA:H:::::::::::ED:::::::T::::::E:::::SR: consensus ADARVIGQFRDLYLLCEADDELLVVDQHAAHERINYERLRAAV---EDEAVPSAAIDPPA #oth 112111.2.22....1111.2..11.2......11..1.22111112322221222..11 HQ3157A :::D:L:::QE:::::SL::T::I::::::::::T::::C:T::::-::TL:TV:::::V hla1042 :::DP::T:C:::::V::G:::::::G::::::V:::W:AR:F:::DG::::T:DL:::V HVO_1939 D:L::::R::G:::::::::::::::::::::::::::::E::::::SAGID:::V:::: Hbo1809 DGV:::::::::::::::::D:::I:H::::::V:::::::::GAG:VN::E:IP:::A: consensus TVSLSPAQAAALDANRDALAALGFELDEFGGG--T--TVRVRAVPAPLGRAAAPDAIRDA #oth 1...112211222232.31231.11333112222112121123....2.212113131.1 HQ3157A ::::T:G:YST::CIT:Q:MTY:Y:YTKRDDTQN:HKAIN:HS::::::QP:::VS:::: hla1042 A::::ADE:::AE:HA:::::::::TEP::::::-:::::L:T::::F:H:VDAT:F::: HVO_1939 :::::::D::L::::::PVEK:::RVV:::E:GG::G:Y::E::::::::PF::::LA:V Hbo1809 :::::::::::TAEW::E::H::Y:::S:::D::-:::::::G::::M::::::ESV::: consensus LAALAGGDTPADARDRL--LADLACHPSLKAGD--DLDAEEATRLLERLGSCERPYACPH #oth 2121321221311212111.11....1.111.1112.2321122.121..2.13..1... HQ3157A ID::QND:::SV:HE:TDT::E::::Q::R::E::I::SPA:DE::NQ::A::N:::::: hla1042 ::T:S::AS:R:::ET::::::::::::::R:EIG::::::LRS::D:::E:D::::::: HVO_1939 V:DV:S::H-::P::E::::K:::::::I::::::::TDD:::::V:::::::T::T::: Hbo1809 :D::R::E::G::T::::::K::::::::::::::A:NT::::::V:::::::Q:::::: consensus GRPTVLSIDEETFVRGFGRRSTRRG #oth ...1..111.211111.1.122132 HQ3157A :::V::T:::MDL::A::::N:::D hla1042 :::::::V::A::AA::::DR---- HVO_1939 :::::::::::::::::::::G:L: Hbo1809 ::::::::E::::::::E:::::M: