| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||
|---|---|---|---|---|---|---|
| Consensus score | 2979 | HQ1594A | Hmu2486 | rrnAC2981 | rrnAC2974 | hla0058 |
| 1484 | HQ1594A | 3920 | 640 | 678 | 696 | 827 |
| 1538 | Hmu2486 | 640 | 2891 | 985 | 698 | 721 |
| 1523 | rrnAC2981 | 678 | 985 | 3068 | 631 | 743 |
| 1331 | rrnAC2974 | 696 | 698 | 631 | 3197 | 763 |
| 1562 | hla0058 | 827 | 721 | 743 | 763 | 3175 |
601 symbols consensus ---MSATDASASRIR-----LRSVLNAWFAV----------------------------- #oth 122234244122322111111133124324311111111111111111111111111111 HQ1594A MPSDNHIM::::::::::::::::::E:II:::::::::::::::::::::::::::::: Hmu2486 ::::GTG:S:::VL::::::V:HLIAQHL:I::::::::::::::::::::::::::::: rrnAC2981 ::::T::LF:::---:::::V::A::R::VL::::::::::::::::::::::::::::: rrnAC2974 MNCC:K:VKNRNT:LAKDTV:AGC:SSL:STGNNRRSGIARSNDVATNCFPGHSNAGASG hla0058 :::::Q:PP:ET:L::::::::A::::Q:T:::::::::::::::::::::::::::::: consensus --------------------------------------------ILLVCLVL-AAVGGYL #oth 1111111111111111111111111111111111111111111131322.211121..22 HQ1594A :::::::::::::::::::::::::::::::::::::::::::::VFLM:A::::::::M Hmu2486 ::::::::::::::::::::::::::::::::::::::::::::AVV:::::::GA::FV rrnAC2981 ::::::::::::::::::::::::::::::::::::::::::::V:::T:T::TLA:::V rrnAC2974 DEGGEERDMSLLTWYQPLFVGTSITVAMWLLGQKTRRTVVDNHEL::I:::AI::::::: hla0058 ::::::::::::::::::::::::::::::::::::::::::::::A::::A::::::G: consensus TYTAHVA-PGTTTEQRQVSSWTVESSFAHAATVTRPTSAFPAGTVLRNRSAYFTRVAPVL #oth 1.24122112.3112221211233131414.2.323132133.12.32123.12212.31 HQ1594A ::::YEN:::::V:TE:::::EANGTYTT::R::E:NPLY:I::T:QGNP::::AAS:II Hmu2486 A:AEYS:::D::::::VTA:::TD:::::Q:::E:S:R::E:::::::::::LF::T:T: rrnAC2981 ::DS::DGAE:V:::QT:GT:::::G:E:G:::S:D:EV:S::ER:::::L:::TAS:E: rrnAC2974 :::G:::::::D:TT::::::QSSG::S:N:::RNG:::::E:E::ED::V:LQ:::::: hla0058 A::T::D::::E::L:T:::L::::EYV:S:E::E:N:V:DT::::DG:NT::::::::: consensus DGAFRFSYSATAAGAATASADVQLVIRSVESDNGGATVYWRTRDPLTQATVDDIAPGETA #oth 114223313233422324223341241212324334212.3223213243344222..31 HQ1594A ::Q:::G::::GS:SV:MT:QQT:IL::ISD:ES:T:E::::TK:IG:RRM::VG:::MM Hmu2486 T:EY::RHEG-:P::::VAT:::::K:::GGTGDDR:EF::VT:S:AS:ETT-:::::S: rrnAC2981 ::TYTV:HDN:EGN::VT:TNLS::::A::ER::NQV:H:Q:::S:DTLDAVE::D:::: rrnAC2974 ::::TYT:::SNESDL::::::FVQY:::::TQN::L:::EVER::::G::QSL:A::HM hla0058 :VDVET::A:D::SDIDI:FESV::TQN:G::D:--::::DE:ET::TE::SGVE::::: consensus TASFSLNVSRQANRARAIESDLGATPGRTELLVVSTVTVEGTVNGESVTRARTYRLTIRP #oth 22223212123433234.33211331.322321233122221211133342113133243 HQ1594A ::::EW:::::YF::QN:SER:NNP::S:Q:::::::QM:::::NQP::E:AQ:::P:EV Hmu2486 RT::RV:::::R:ET:Q::RE::G::::I::F:LV:TN:TT::D::RLE:S::E:::::: rrnAC2981 :TTV:VDIPTIL::TE::QN::::A::Q::V:L:ADT:::SS::::TF:DT::D:IE:V: rrnAC2974 AVPL::::::A:EAV:R:D:EH:Q:S::LKIA:::Q::LS::R::Q::DT:::::----- hla0058 ::::A::S:EVDAT:SE:::::::S::E::TF:TTA::::::I::::TSY:::IEM:LDH consensus GGATYAVSE-TTGAADTGDSTEQVTRAQEYGPLRRYGGPVLAVFGLLGAAGLAYARR-RD #oth 33322423413334433443123.224333332232112334232133333122223123 HQ1594A N:::FEPAG:VQ:S:L::ST:T::::Q:T::Q:W:L:::GAI::::::LITV::IYIGTE Hmu2486 AT:::::TSN::::R:EPI:::T:SVPV:KNSA:I:::VAF::LS::A::::VV:D:::: rrnAC2981 :RSV:R::T:::AGETPY:A::::::TI:PTR:EL::::::C::::FCM:F:GT::W::G rrnAC2974 ---------:---------:GPS:AS:PAWL:W:::--------------S:V:G:T:T: hla0058 ::D::T::::PGLQS::TEQ::P::VE:S:::::ST:::::FLA::A::S::::::::EV consensus RLALTDAERRALRFERTRDEFDEWITTARLPEPADDRPTASVDSLVDLVDIAIDSDRRVI #oth 41322121134342323.32.11..1221311312123323221.32...3...3.3112 HQ1594A L:NIS:::::FVT:QSS:::::D:::::E:::A:T:::::::ET:EG:::T:::I:S::L Hmu2486 ::SVPPETVA:I:T:::::R:::::SVG:V::::::DRVVT::::T::::V::::::::: rrnAC2981 W::V::R::VRNE:::A:ND:::::S:::I:D-::::TPVPT:::::::::::::::::L rrnAC2974 YFT:::::::W:VYKS::E:::::::VG:-DD:V::VW:T::::::W:::::::T:E:I: hla0058 D::::P:::EY:SYRDD:S::A::::AI::::SVHN::E:EAS::R::::F:::N:TG:V consensus EDGDDGAFAVLTDDRLYTYAPPP------EPNAGNTEPVGESSAGATDSDES--T-D--- #oth 122333314132134323.41222123332244343123413241333343233232111 HQ1594A TPPEET::Y:PH::L:CV:R:S:EVQSVM:::STERTT:P:::KDTV:ES::SE:S:SFL Hmu2486 ::::::R:V::V:RVR:C:E:RA::::::-:T::S::S:SDG:N:::::VG-::-:-::: rrnAC2981 ::::Q--Y:::V:SEI:::TA::TVDPLAS:STRD:::TV:DRE:::A:LS:LLFT:::: rrnAC2974 :SNS:SD:L:Y:G:::FR:D:::::::::-------::RTD:TM:-------::-:-::: hla0058 ::PGT::YHAV::EFV::::::T:::LAV:GGD::E:TE::TT::VAGD::AID:DE::: consensus -----STD-SD-T-DDG-------------------NEDAEDSDG--------------- #oth 1111122132232341322222122222222222112322343.3221111111111111 HQ1594A SVLGG:::D::EQET:NSETSQDSQATTDNKSAQSEP:SESEP:ESTIAEESGASVTSTD Hmu2486 :::::---:--:-:E:::::::::::::::::::::PDP:R:D:S::::::::::::::: rrnAC2981 ::::::::NA:V:HP:E:::::::::::::::::::::PSDSN::::::::::::::::: rrnAC2974 :::::---:--:-:---::::::::::::::::::::S:::T::-::::::::::::::: hla0058 :::::TA:V:AA:D:::AWVGADVNSAQTSDGRGSEAA:S:P:::AN::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ1594A WDAIASSEQDQEQANGDADTDTNTDQTSDFDVGIFDNRHSESESEPTSDTGDRSTDNTED Hmu2486 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2981 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2974 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0058 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus - #oth 1 HQ1594A N Hmu2486 : rrnAC2981 : rrnAC2974 : hla0058 :