| |||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||
|---|---|---|---|---|---|
| Consensus score | 4883 | hla1578 | HQ2276A | Hmu0505 | rrnAC2119 |
| 3720 | hla1578 | 4885 | 2991 | 2926 | 3169 |
| 3846 | HQ2276A | 2991 | 4856 | 3039 | 3407 |
| 3749 | Hmu0505 | 2926 | 3039 | 4792 | 3287 |
| 4149 | rrnAC2119 | 3169 | 3407 | 3287 | 4947 |
647 symbols consensus -----SGDTDDEDLLEELASLPTLAHPTVSPDGNEVACYYDVTGRNELHVLDVEAGEREQ #oth 11112233212121.11..2...211111....321.3...21......111123.2211 hla1578 :::::MS::::A:V:R:::::::I:S:R:::::ET::L:::::::::::L::PRD:N::: HQ2276A ::::M:HVA:T:E::::::T:::::::::::::DQI:F:::I:::::::::N::S::VT: Hmu0505 :::::----M::::::A::::::FH:A::::::::::V:::E::::::::V::AT:::TR rrnAC2119 MSDPD::P::P:AV:::::G::::::::A::::S::::::::S:::::::::::::TH:: consensus WSDGDVPRNARWHVEWDADGDRVFFHLDDDGNEQNDVYAISRDGSVEAVVEMDGQVVLQD #oth 1.1.1...11.1221.211.111.1.1.21.1..1.111122..22.11.11...22121 hla1578 L:::E:::SV:AGF:::PS:::L:Y:R:E::D::H::W:M:L::ES:PI::::::LR:HS HQ2276A ::E:::::::::PIN:A::::S::::::NN::::::I:R::Q::KA::::::::::AIN: Hmu0505 ::::E:::::::::::G:::::::::::::::::::::::A::::::P::QL:::T:::: rrnAC2119 ::::::::::::::::::::E:::::::::::::::::::D::::::::::::::::::: consensus VGEDGETLLVGSSRDGQMNLYRHDLASGETTKITDYDRAVAAGELSPDCDRIAYATNETD #oth 11...1..12..111...1..2.11311..211.1.1..12213.1.11211......1. hla1578 :S:::::::L:::::::::::::::Q:D::::L:::E::::::::A::G::::::::::: HQ2276A I::::D::II:::::::::::N:::S::::A:::E:E::A:GAI:::E::Q:::::::S: Hmu0505 ::::::::::::TAS:::Q:::::C:T::::QL:E:::::G::V:::::E:::::::::: rrnAC2119 ::::::::::::T::::::::S:H:G::::S:::::::::HT:L::::GSQL:::::::: consensus AFDNQDVYVADADGSNPRNLDIGDTGAEAAPADWGPDGDRLLVSDNSEDLGRSGVYDLST #oth 311.3.2.11.1.112221.1..21...12.2......1...12..12..2.2.11.122 hla1578 :YE:L:::::::::::::::::::V::::::I::::::::::::::T:::N:::IV:::G HQ2276A N:::::I:I::T::ATTQ:::::::::::S::::::::E:::I::::T::::L::::VNS Hmu0505 T:E:T:T:::::::::Q:::E::E::::VG:V:::::::::::T::TA::::C::::::: rrnAC2119 D:::M::::S:::E:D:ET:E::V:::::::::::::::::::V::::::S:::::::E: consensus D-----EVTWFGGDEFEESPQAFLPDGDRFLAVRTREAAKVPVIYDAETGEARELDLPAG #oth 11111111..1111.11.21321.12.111112.1.11322111.131..2.111.1.2. hla1578 :VSGAAD:::::::::::::SH::EA::Q:V:S:::G:VT::::::V:::::::::F::: HQ2276A E::::::L:::EN:::::::K::::::K:V:GY:S:::ES::I:::S:::::T:F:::G: Hmu0505 ::::::::::Y::-::D:DAES:::G:::::::::::C::EV:V:::R::A:TT::::S: rrnAC2119 :::::::::::::-:Y::E:::L::::K::::::::::T:L::V:GI:::D::::::::: consensus VASFGR--GEAILDDDRLLALHTTPTRRPELLAYDLATDETETLVEAEYGPFSPNDFADA #oth ..12121212221132.21231..121....13.111111112122.1..112112.111 hla1578 ::NVT-::-:GR:A::::::YR::SS:::::V:::::S:A:::VLD::::::A:D::VEP HQ2276A :::::T::-:::V:KN:VVLT:::::Q:::::I:NIE:H:HK:::::::::::T:::::: Hmu0505 :::L:::A:S:VV:EE:IVCS::::D::::::C:::::::::Q:IA:D::DLD:DR:V:: rrnAC2119 ::::::MG:DP:::G:::::::::::::::::T:::::::::P::::::::::::V:::: consensus EYFTFESDGVPETDQAA---VEHDPYEEFEIEALLFDSGERPSPLIVNPHGGPRGRDSRR #oth 112122.1..1.1221.111.121.12221.12..1...2....1.1.......22.113 hla1578 :TVS:V:::::::PAR:::::D:A::::::::G::::::R::::::::::::::H::::Q HQ2276A D:I:V::::::::::::::::::::::::::G:::::::Q::::::I:::::::A::TK: Hmu0505 :::::D:A::A:F:DR:GQG::S::-ASR::::::Y::::::::A::::::::::Q:T:G rrnAC2119 ::::I::::::::R::::::::Y:::DTLD:GC::Y:::::::::::::::::::M::KS consensus FDLYTQFLVSRGFSVLQVNYRGSTGRGREFVEELYDDWGGAEQGDIATGTEHVLAERDWL #oth .2111.1.222.1...1........1....2211......1..1.11122111.3131.1 hla1578 :SYRV:::LA::Y::::::::::::::::::::::::::::::::V:::V::::N:Y::: HQ2276A :N::::V:::L:::::::::::::::::::::::::::::::::::V:I:::::D:H::: Hmu0505 ::::::::C:Q:Y:::K:::::::::::::AQAI::::::N::A::::::T-I:::KE:V rrnAC2119 :::::::::Q:::::::::::::::H::::IR:::::::::::::V:SAA::::ST:E:: consensus DDDRVAVFGGSYGGYSAYWQMVQYPDLYDAGIAWIGLTDLEDMYENTMPHFRTELMEKNL #oth 111111.1.........11.111..1..2..1..1.11..2.21.1..1.1....11.12 hla1578 :E:::::Y:::::::::N::::::::::A:::::V:VS::F:::::::::::::::V::: HQ2276A N::Q:V::::::::::::::::::::::E::::::::::::::F:T::::::::::::Y: Hmu0505 ::::I:::::::::::::C::TM::E:::::V::::V:::R:L:::::::Y::::L:::V rrnAC2119 ::E::V::::::::::::::L::::::::::V::::::::::Q:::::A:Y::::::::M consensus GTPEENPALYEERSPITHVENLDAPLLIVHGVNDRRVPVSQARIFRDALDDAGYEEGDDG #oth .2.21.121.2....11112..1..1122.....1........11111.112121113.1 hla1578 :E:D::E:::R::::V::::::::::::::::::P:::::::::L::::::::F:::V:- HQ2276A :::T:::EI::::::VNY:S:::::IFLI::::::::::::::::KE::E:RDL::T::- Hmu0505 :S::::::::D:::::::A:::A::::VL::::::::::::::L:::R::EL:::A:E:: rrnAC2119 ::::K::D:::::::::::D::::::F::::::::::::::::L:::::E::::T::P:: consensus -YEYRELGEEGHASSDIDQKIRTFRLLADFLDRRVGT--EAVAA-DD #oth 21..3.......1.2.21..2.2122.11..2..2122232222111 hla1578 ::::E:::::::G:G:::::::SLE::D::::::I:AERT:::SL:: HQ2276A ::::K:::::::::::Q:::L:::QA::N::::::::NPKSIV:::: Hmu0505 D:::V:::::::::T:V::::::::T:::::E::L--::-----:-- rrnAC2119 AF:::::::::::::::E::K:L::::D:::G:::::::::::::::