4 genomes BUD2276 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG6011 - - - Hut2218 Hut2429 hla2139 - HQ3604A

Pairwise sequence scores
Consensus score	1735	Hut2218	pNG6011	HQ3604A	Hut2429	hla2139
1450	Hut2218	1733	1368	1308	946	934
1576	pNG6011	1368	1748	1577	968	906
1528	HQ3604A	1308	1577	1937	934	891
1100	Hut2429	946	968	934	1688	1162
1040	hla2139	934	906	891	1162	1683

248 symbols
consensus       ------------------------MYEVCGETAAQVILAIEPGDSIRRVAQHIDEPYETV
#oth            111111111111111111111111..11211111112..212..1.21..1213211..1
Hut2218         ::::::::::::::::::::::::::::I:::::::V::A:D:::::::::R:QR:::::
pNG6011         ::::::::::::::::::::::::::::LDD::::::::::S::::::::::LHT:::::
HQ3604A         MERWWFYAHSSKIFNCYQIIGNYQ::::LDD::::::::::S::::::::::LYT:::::
Hut2429         ::::::::::::::::::::::::::TA:::KELKTL:::D:::T:VG::RK:::NR::I
hla2139         :::::::::::::::::::::::::::::::KELK::::LD:::::SG::RK:::NR::I

consensus       RQAVNRLEDAGYVAYDDGLSVVDEHVRDAARELLAASAGVSPPSIEEAYVLPQFGDWPFA
#oth            .12.1...21.114.....212.331.1.1121111..21.1...2.1..1...12121.
Hut2218         :::::::::::FLG:::::TLP:H:::E:::D:::S::R:::::::::::::::::::::
pNG6011         :::::::::::::T:::::::::::::::::::V:::::::::::::T::I:::::::::
HQ3604A         :::::::::::::H::::::::::R::::::::V:::::::Q::::::::I:::::::::
Hut2429         :RT:D:::AE:::E:::::T:L:DG::::GLQ:::::::::::::S::::::::ANMD::
hla2139         :RV:::::E::::::::::HL::QTL:::GL:F:T:::NI:::::A::::::::AGMEY:

consensus       FTRIDAVYVWTRGGYQVAREPDDYPLFIAVRERDVDAWEAFFDSFDLPTAFERQPREELD
#oth            1.1........2.....1.1.2.....2..2.4.312.12..13.11.123..1.23322
Hut2218         :::::::::::H:::::::::::::::V::::::I:N::T:::::G::::L::::S:AVQ
pNG6011         :::::::::::Q:::::G:::::::::L::::H::::::T::EW::::::::::::D:::
HQ3604A         :::::::::::Q:::::G:::N:::::L::::E:::::::::E::::::E::::::H:::
Hut2429         ::G:::::::::::::::::::::::::::E:S:FEG::R:::Q::I:VSR::::::NI:
hla2139         Y:G::::::::::::::::D:E::::::::H:P:L:::T::::R:GI:::E::L:AAD:N

consensus       GPLQVVLEPRASLDIEHVEGYPVIPRAETVEYMRENYAQFQSALAMLDRMYEDLDLGVTY
#oth            111.1.111122113.3.1.1...212..12111.21.2...1.2..1.1.122.21131
Hut2218         ::::::::::P:::S:Y:::::::::::::T::::HS::::::::::::L::::::::A:
pNG6011         ::::I::::::L:::::::::::::::::I::::::::::::G:::::::::::::::::
HQ3604A         :A::I::::G:::::::::::::::::::I:::::::::::::::::::::::I:::::C
Hut2429         ::::::V:S:D:I:A:S:D:R:::TLD::::FA::Y::T:::::S::::::DEV:SDAD:
hla2139         SAI::::K::PQIEP:R:D:R:::SLQ:::AFAN:H::H:::::D::G:::DSV:TDAN:

consensus       RETERAQP
#oth            .2322111
Hut2218         ::G:::::
pNG6011         ::::::::
HQ3604A         ::::::::
Hut2429         :MEPA---
hla2139         :PN-----