4 genomes BUD2298 5 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC1050 - - - Hut0210 - NP4840A HQ2130A HQ3577A

Pairwise sequence scores
Consensus score	1262	Hut0210	rrnAC1050	NP4840A	HQ2130A	HQ3577A
839	Hut0210	1237	764	693	727	721
846	rrnAC1050	764	1289	672	764	752
880	NP4840A	693	672	1260	765	772
1114	HQ2130A	727	764	765	1293	1174
1117	HQ3577A	721	752	772	1174	1264

178 symbols
consensus       --MWVFDATPLIYLAKADRLALVQALEASCVLPERVYEEVVETGLEQGYPDARRIERSVD
#oth            1112........1.11211.311341132112.21..1...12.111.11.11.1.21.2
Hut0210         :::Y:::::::::::TV:::GMLTEF:DDRLV:::::D:::TV::DA:HA::::V::A:E
rrnAC1050       :::F:::::::::::::E::S:LSR:D::RLI:Q:::::::TV::DA:::::::::Q::E
NP4840A         :::::::::::::::::EQ:EM:A:::KR::::GS:::::::A:I:::::::C:V:HA:T
HQ2130A         MWA:::::::::::::V:::::::Q:DG:::::::::::::::::::::::T::::::::
HQ3577A         ::::::::::::S:V:I:::::::H:::::::::::::::::::::::::::::::::::

consensus       ADRFDVVSVEETPLLSRLADNDNLSDADVAVLACAAAHDGVAVMDETYGRDVAAAEGIET
#oth            21212112112.2113..43122112..11..11.1211111...13...11..1.1.1.
Hut0210         D:VLT:AT::R:ASFE:::A::S::E::A::::L:::R::TG::::Q:::::::::::::
rrnAC1050       EGT::::::P::T:FD::SG:P:V:::::::::L::D:GAT::::DA::::I::V:A:::
NP4840A         DGTLA::EG::::::G::REA:G:TT::AS::::::T:::::::::S:::NI::::::::
HQ2130A         :::::I::::T:::::::Q::S::::::::::T::D::::::::::::::::::::::T:
HQ3577A         :::::I::::T:::::::L::S:::::::::::::D::::::::::::::::::::::T:

consensus       RGTAYLVLKLAKRGAISADDARETIDAMIDAGWYCAPDVYAKILRKLESLAD------
#oth            ........3222212131121.12111.2.1..1.1.11.3.2221112112111111
Hut0210         ::::::::RSL::D::T:EE::::::::V:::::::::L:::L::RI:D::-::::::
rrnAC1050       ::::::::S:VRD:ELE:::::::LE::L::::H:S:SL:S:L:S:::E::VGGADNR
NP4840A         ::::::::LAV:::T:D:EAG::A::S:L::::::S::::G:VV:::::FE-::::::
HQ2130A         :::::::::::SE::::V::::TV::::::E:::::::::T::IQ:::::::::::::
HQ3577A         :::::::::::SE:T::V::::TV::::::E::::::::::::VQ::D::::::::::