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4 genomes BUD2299 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2836

- - -

Hut1888

-

NP3538A

HQ2439A

Pairwise sequence scores
Consensus score2867 Hut1888 NP3538A rrnAC2836 HQ2439A
1798Hut1888 2911 1594 675 712
1652NP3538A 1594 2947 672 686
1459rrnAC2836 675 672 3288 1259
1533HQ2439A 712 686 1259 3014

474 symbols
consensus       ----MRPRTAVRR-----------------------------------------------
#oth            111113222322111111111111111111111111111111111111111111111111
Hut1888         :::::N:LASIG::::::::::::::::::::::::::::::::::::::::::::::::
NP3538A         :::::SI:SIL:Q:::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2836       MAVASQ:::L:::VHAAVVWRVATSMGRCRSDSSACSAGVFRLRCVQVGKRMAAAEQLRQ
HQ2439A         ::::::TN:::S::::::::::::::::::::::::::::::::::::::::::::::::

consensus       EANALRGDGRGRALGAIAAGWGLLLGARMVYPAVLPALRDTFGLSNAVAGLAVTVLWLTY
#oth            2231112212133.311.31.2111.3.121.121.3223212211221.111.21.222
Hut1888         ::K::WSE:::PS:::::GT::::::T::I::VL::::::D::::LS::::L::I:::GS
NP3538A         ::T::W:::K:F::V:V:V:::::N:::::::VII:Y:QE:Y:::L:::::LI::::FFA
rrnAC2836       RV::M:HGSPA:M:L:V::::F:V::M:F:V:::::TI:KE:VI:::E::::::::::::
HQ2439A         ----:::::::WT:IS::L::VFV::G:FLV:::::QVKT::AVG:LGV:I:::LM:A::

consensus       AIGQLPAGILADRIGERRLLAAGTLVAAGGLTLVVAAPVAAVLLAATAVFGLGTGLYGIA
#oth            .22.2.2.1.1..32..311322212312212222211212211311122.11211.111
Hut1888         :L::::S::::::FS::SVM:T::::::L:V:::::::T::::F::::LV:V:QS::P::
NP3538A         ::::::G::::::VD::V:ML:::V:V::A:::::TSSS::::FF::::W:::HSV:P::
rrnAC2836       :AV:F:::V:I::::::T::V:AA:LSGV::LGYFF:::FSLF:I::GA:::::::::PT
HQ2439A         ::M:S:::::I::L::::::TGSL:FT::SVVILG::::FIIF:SGCG::::A:::::P:

consensus       RGTALSRTFPARDGSALGVTMAAGDLGQAILPPIAGALAAAIAWRAGLGSAVPLLLVASL
#oth            .1.2.1221231312.2.111.1.12.2121.22.23122331.12222231.2121322
Hut1888         :I:I:TDMY:D:I:::::::::T:::::T:V:::::T:::::::Q::F:MM::G:::G::
NP3538A         :I:F::NLYRE:V:::::::::T::I::T::::V:TV:::GV::Q::::FI::P::::G:
rrnAC2836       :::::::::D::E:T:F::V::::S::A:A::A::AFVTTRYG::LA:A::A::FMLVAG
HQ2439A         ::::::::::SN:NA:I:A:L:::SV:S:V::LT:::VVDELG::VVII:L::::A:T:V

consensus       ALHLVISSRQG-TPPGASESDNRRGELAA-------IRALRNRAVALAAGILFLMLFAFQ
#oth            1232232213321211311233132323311111111331.323231333222.12121.
Hut1888         ::M::LP:QT:S:DT:GTSD:::L:::--::::::::SD::EGD:LFL:F::::YVLVW:
NP3538A         FVVVTS::::P:-K:TR:::EPQ::M::::::::::LKT::TP:IG:MT:::::YM:IW:
rrnAC2836       ::W:SV:D:--:-:T:E::RSL:QDLRTV:::::::LTGF:::RLV:SVSGKT:::::::
HQ2439A         FT:R::AN:HTT:::T::::TS:SQIVSIQGLIANG:::::H:G::::GTAVA:::::::

consensus       SFTAFYPTYLTTVKGLSQATASLLLSLLFAGGAVIQPVAGAAYDRIGERRSLTAVLLGAT
#oth            2211.12...1221222231.2211221.22.1231221.2221.3.3132.11122331
Hut1888         :::G:::::::EE:PV:KP:::::F::F::F:V::K:A:::::::::P::::V:::S:PV
NP3538A         :::::::::::::::FAP::::::FGFF::V:V:VK::::T::::L:V:T::VG:::P::
rrnAC2836       AV:::LT:::V::R::::G::GA:::V::V:::LS:T:T:RLA::Y:TPSV::::A:VS:
HQ2439A         GLS:::V:::VSA:Q:D:SL:AGM:A:::L:::IT:VT:::ITT:F:::IT:::MTVIGV

consensus       VGLGLLPLVDGVVPLAVISALIGARLGIGAITNAFIAEVLPDTARGTGLGILRTGFAALG
#oth            221312.2112222112112111311131122111132212.223.111.31.1221222
Hut1888         :::::::F::SLPA:V::T::VSTM::S::::QS:LS:AFS:E::::::::V::SA:T::
NP3538A         A:FL::::T:N:LFIVG:T:::S:M::T::::QS:L:::FA:DMK:A:::VV::LT:::A
rrnAC2836       :P:V:I:S:R::::::IV:GV::V:MSV:PLA::Y:VDT:::::E:::W:L:::::F:IS
HQ2439A         PA:IAV:::::I:::::V:V:::S::::APVS::Y:IA:::::VT::AW:T::S::FLF:

consensus       AAGPTVFGVIAERGLFAEGFFLLAGLMAVAAVLTLVLPARR-------------
#oth            13.1121.22122211122122.1121122111222213232211111111111
Hut1888         ::::VL::::::::Y:D::Y:::::::::IV:::::FFEE-:::::::::::::
NP3538A         :G::V:::::G:Y:Y:DW:YIA:GVI:::VV::::WM:KA::::::::::::::
rrnAC2836       SL:S:AV:LL:DQN:::LA:YG::::TLL::GTFV:::R:DRL:::::::::::
HQ2439A         :T:S::V:AM:S:E:L::S::::::VT:I::::YAR::::TVANSDTKGETSAP