|
Pairwise sequence scores | |||||
---|---|---|---|---|---|
Consensus score | 3932 | NP0758A | HQ1310A | HVO_2440 | hla0282 |
2409 | NP0758A | 4225 | 1435 | 954 | 1733 |
2628 | HQ1310A | 1435 | 4172 | 1301 | 2034 |
1740 | HVO_2440 | 954 | 1301 | 2427 | 1347 |
2885 | hla0282 | 1733 | 2034 | 1347 | 4139 |
612 symbols consensus ----RRDRNVDRRTFLQYAGTAAATAA---LAGCNDNG-GNG--N--GADGGDEAAGEDR #oth 112233333221122232312221222111211133211131221221332223331333 NP0758A ::::MS:EG:::::::::G:::::A::SVSV::::G::D:::NG:GT:NGD:EP:T::P: HQ1310A MSDES:E:DI:::S:VKL::::T:::::::::::GSS:::G:::-::::E::::T::TSQ HVO_2440 ::::-----------------------:::--------:---::-::------------- hla0282 ::MS:DHS::N:::Y:T:V:GT:::VG:::::::S:::::S:ED:EN:S::S:GSD:S:G consensus GDEEALPDDETREE-L--AN---N--AP-I-L--QYS-YG----L-WDAR-DE-I----I #oth 332232232221112122112221221121212211121122221211112112122221 NP0758A TFD:E::::P::::L:EH::GMA:AL::F:Y:HQ:::I::VSED:D::::G::D:LVRE: HQ1310A SG:T:ADT::S---:-::--:::-::--:-:-::---:--::::-:----:--:-::::- HVO_2440 --------------:-::--:::-::--:-:-::---:--::::-:----:--:-::::- hla0282 ::::Q::EP:::::H:QR::LRL:QR::W:F:NR:::V::IASR:G::::R::R:EAQA: consensus DTDREE--VTITQGQMPDALDPHDHRNTPTDNVLRQAYEGVLGRNRDGRIVAALATDWER #oth 323331222211123223321121123212222331212212312231322332112221 NP0758A ::::::::I:::::TF:G:M::L::ND:::H:::N::::P::Y:D:E::T::RI:::::: HQ1310A T:GSK:FP::::::::::T::::::::I:A:I:M::C::::IS:::Q:Q::SM:::E:R: HVO_2440 ------::---------------------------------------------------- hla0282 SVTEG:PS:A:::SS:DSG:::::::E:::::IVV:::D::::::A::D:ID:::::Y:: consensus REDGRVRFEIRDGVTFHNGD-ELTPADIAYSINRAVDPEVG--SPQAGQLGGVTGAEVVD #oth 323222212212121123221222231212221132122112212122222222212221 NP0758A :DETT:A::V:::::::S:N::M:AD:V:F:::::N::::-:::D:::VI:AIDE:RAE: HQ1310A V:P::A::S::E:P::QQT:NQ::::::::T:::M::DD::FT::::::::::::::::: HVO_2440 --------------------:--------------------::----------------- hla0282 L::::::::::::::::::::::Q:S:::::V::V::::::IS:::ND::A::::::::: consensus GEVAVDL--DGINPIVFSEFAAYCDVMQRAWTEERDQSYINQ-NMNGTGPFQLAEYEQDV #oth 2223123112232121.22113122.1113.2.211322222131.....1113212211 NP0758A :::V:::::EAVV:TI:FNLT:FGR::E:E:::A:::GDL:DGEV:::::YE:ENFAD:: HQ1310A D:R:::VLS::L:::::A:::I::::VEQ:::::NES::VA::::::::::E::::::N: HVO_2440 -------::------::::::T:L:::::S:V::N:KA::S::H:::::::::DS:TE:E hla0282 :G:E:TS:::::::::::L::S::K:V:QD:I:S::T:A::S:D::::::::VV:::::: consensus EVVYERYDDYWREPAEVDRLTFRAASEASTRVNQLIAGETDLIVNVPPQEVNRVRNSDNV #oth 112222112..2121222311121112111..21.111.1.111..1.12.311332132 NP0758A ::A:::F::::D:NPGP::VV:N:V:DEG:::DR:::D:S::VT::N:RD:GELQGA:G: HQ1310A Q:TFD:::E::::::::TQ:::TS:QQ::A:::::::::::I:::::::S::::DS:ES: HVO_2440 :::LTA:E:::::::A::T::::::::::::::::LQ::::::::::::::Q::T::::A hla0282 :I:::P:EG::GDAP:IEE::I:S::::::::S::L:::::::::::::::S:::DE:TT consensus EVAAVPSTRIIFNGMRYDVEPFDSLEFRQAMNYAIDLESIIDNILQEFGEQTGQPTLEGF #oth 213111.1.21112.1222...1.11..1...1.1.111.1321.21.122.1....221 NP0758A :PQG:::I:N::IV:NDAK:::::::::::::::V:V:A:::G::D::::L:S::::::H HQ1310A S:N::G:::::Y::::SNA:::S::S::R:::F:V::::::TDV:::::::::::::QP: HVO_2440 R:::A::::::Y::::::::::::V:::::::::::::::VQ:V:GG::A:::::::PE: hla0282 ::T::::::VV::A::::::::S:V::::::::::::D:::E::::G:ADA::::::::: consensus FGHNPDIDPYPYDPDQAEQLVEESGHAGAEIELHTPVGRYLRDLEIAQAVAGQIDDLSNV #oth 1.1.2221..12.121..2.1.1..1.1111112.21....1.22..11..12..1.2.. NP0758A :::::RV:::::::::::A::::::::DV:::V::TT::::::TD::ET::::::::D:: HQ1310A ::Y:D::E::AH::AE::R:I::::::::SLT:::::::::K::Q:::::::M::::::: HVO_2440 V:::::L::::::::::::::::::Y:::::::N:L:::::K::::::::::Y::E:P:: hla0282 V:Y:EE:::::Q:IE:::::::D::::::::T:E:::::::::V:::::::S:::E:::: consensus SATVEQRDFASLANELTAGDIEARPAFFLIGWGNATFDASQTMNPLLTSDGA--LTSFQ- #oth 112121..131.23.223.21233.321.2..112.1.1222231212111211122221 NP0758A :::A:L::TQ::F::SQT:NQDDS::I::M::S:P:L::DYA:T:WFDPED:FGIAH:S: HQ1310A :CD:K::::NT::S:::D:::TTG:K:Y::::::::::::::V::T:::::V::::::K: HVO_2440 T:::R::::G::VD::L::S:::::PW::::::E::::GGLV:EA::S:::T::::TW:: hla0282 :CE::::::::::G:V:S::::NM:H:Y:L::::T:::::::II:::::::::::S:Y:G consensus DDELDELLEEAQNTPGEER---L------------------------------------- #oth 212212.23212222221322212222222222222211111111111111111111111 NP0758A ::D:L:::HR::E::L::E:::-::::::::::::::::::::::::::::::::::::: HQ1310A S:Q::S:IT::NQ:AES:QREQ:LQQANAFSHEQAPWIFLNRQFGVYGSTNRIDWQPRND HVO_2440 NE:F:A:::Q:G:QS::::EAT:QEANWPTTSARGYS::::::::::::::::::::::: hla0282 :::V:::MS:S::L::GN-:::-::::::::::::::::::::::::::::::::::::: consensus ------------ #oth 111111111111 NP0758A :::::::::::: HQ1310A ERIDAYSISSAE HVO_2440 :::::::::::: hla0282 ::::::::::::