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[R] (-) COG3413 Predicted DNA binding protein
3 genomes BUD2310 4 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG0113

rrnAC1953

HVO_1419

HVO_B0072

 - - - - - -

Pairwise sequence scores
Consensus score1651 VNG0113 rrnAC1953 HVO_1419 HVO_B0072
1282VNG0113 1683 1190 425 520
1247rrnAC1953 1190 1659 427 545
663HVO_1419 425 427 1365 726
839HVO_B0072 520 545 726 1649 

226 symbols
consensus       MAIVAEILLADEDLPLVSVADAIPSGELSISNAVCLDDGRLLFTVRVAADS-GAFEADLL
#oth            111221221223311112222222221222222231322322112313212222213112
VNG0113         :::::::::::P::::::::::::::::::::S:P:::::::::I::::::QA:::DEAR
rrnAC1953       ::::::::::::T::::G:::S::::::::::::G:E::K::L::S:N:::R::::RE:G
HVO_1419        -----------------------------------------V:MLY:DP:A:DIS:P:::
HVO_B0072       :::TT:FV:RSTS:::::IPT:LRPD:VECVH:L::QPDVQI:::QFERED::VTK::::

consensus       ARDQVVAADAIGATADGWFYKITVALADDLSAAHDPEEFEGVAVEATVVTADGIHEQKVF
#oth            13111221211.31111211222132233122112.22.2121212.1..2..12.2.1.
VNG0113         :HP::ASVSE::::::::::R:I::DTTG:V:S:::A::::::L:::-::::::::::::
rrnAC1953       :QP:ITD:AE::Q:::::::::V:DN:P::I:S::::::::::MD::-::S:::R:::::
HVO_1419        :F:E:::V::L:RASGKDVFQT:IQ:D:VV:E:FA::R:TATQ::R::::P::WY:K:L:
HVO_B0072       T::E::::::::E:::KGV::L::E::ESV:K:FE:D-:G:AQ::P:::::::W::T:::

consensus       SDYEAFNALRDRCAVNDIPLELVSIASDPEAPDERDQFGLTDRQYRALTLAISRGYYDSP
#oth            22.211232.21.1221.121.22.11212321.22121..11.21.222.311...1..
VNG0113         :::D:LAT:::::::::::F:::A::::::H:G:::::::::K::::IRT:FA:::::::
rrnAC1953       ::::::S:::::::::::::::LN::::::N:G::::::::::::::MSV:L:A::::::
HVO_1419        QN:N:::GM:T::EEYG:SI::I::TQN:RER::SS:Y:::E::QE:::::::::::E::
HVO_B0072       KE::G::EF:ES:EAHG:S:D::::::EGS:S::PTD-S:::::RE:::::V:::::E::

consensus       RQCSTEELAAELGISAAAASDLLRRAERQLITSTLGPQAARNAHAQ
#oth            .12112...21111.1112.1....1.11.12121.2233223322
VNG0113         :::::R:::::::V:::::::::::::::::GE:V::EH::PM::P
rrnAC1953       :R:::A:::DK:DV:::::::::::::K:::S::V::DQF:::L::
HVO_1419        ::V::::::E:M:::QPSM:S::::G::::L::A::S:SQI:TVSR
HVO_B0072       ::TTA:::::K::::QPSL:S::::G::E::::S::M::RMQPPT: