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3 genomes BUD2319 3 proteins
a Hsa
Halobacterium
sp. NRC-1		 b Hma
Haloarcula
marismortui		 f Hvo
Haloferax
volcanii		 g Hbo
Halogeometricum
borinquense		 h Hmu
Halomicrobium
mukohataei		 i Hut
Halorhabdus
utahensis		 j Hla
Halorubrum
lacusprofundi		 q Nph
Natronomonas
pharaonis		 x Hwa
Haloquadratum
walsbyi

VNG6226

rrnB0336

 -

Hbo3844

 - - - - -

Pairwise sequence scores
Consensus score1151 Hbo3844 VNG6226 rrnB0336
684Hbo3844 1135 482 571
792VNG6226 482 1002 629
946rrnB0336 571 629 1287 

171 symbols
consensus       -GGNSFKSGSGNLDFGGDDEEDED-----AEEADDAADEEADAADPQEAQPEEEDDSRD-
#oth            12121..1.1.1.1..1.2111111111122.11.222211.222122221122222211
Hbo3844         :-MSN::::::::::::::::::T::::::T::A:TQTK:::STTE:PT:::S:ESVP::
VNG6226         :M:::::Q:A:D::::::STA::::::::--:::::TESGP:::::-------------:
rrnB0336        M::D:::::::::S::D:Q::AD:EPAEAG::I::I::::::DRE:K::T:::V:::::F

consensus       SEAKGANSPTEESTTS----------QTDAHQYPYFVRRSNVGDERDNRLEIFARDKVVA
#oth            2122222111.1111.1111111111212112.......11......1...211..1.12
Hbo3844         T:RSSNQ:A:::::A:::::::::::-SP:DK:::::::::::::::T::::HV::::AD
VNG6226         -------T:::QGA::::::::::::E::G:T:::::::NT::::::::::V::::R:::
rrnB0336        :::::::::N::::::TPTANDAEPH::S::::::::::::::::::::::L:::::::S

consensus       QEAEFRSQLAARLGTDAVSKTDAREYALLAAFDNVDAVAELMANDGYGELD
#oth            1..1..11..22.1.1211......1...1.111111..11.221.1.112
Hbo3844         :::A:::E::EQ:::NE::::::::F:::M:YQHP:R:::::QDE:F:T:G
VNG6226         ::::::R::::::D:::::::::::::::::::::::::DR::::::::TE
rrnB0336        R:::::::::SE::::DIA::::::::::::::::E::::::RG:::::::