3 genomes BUD2346 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0250 HVO_A0508 Hbo3896 - - - - -

Pairwise sequence scores
Consensus score	825	rrnB0250	HVO_A0508	Hbo3896
620	rrnB0250	1381	492	476
675	HVO_A0508	492	836	560
659	Hbo3896	476	560	819

177 symbols
consensus       MIWEVFRQDKPGAYHQHCGNVHAPDREMALQFAAVQHGRRKPTHSLWVVPQDEI------
#oth            ........21111112..11.......1.11.121..1..11.11...1.211.111111
rrnB0250        ::::::::QS:D:DFV::RD:::::::::K::SVI:::::::::A:::A::EK:TQVDPD
HVO_A0508       :::::::::::::::K:::::::::::L::::::::::::MK::::::::H:::::::::
Hbo3896         ::::::::E:K:D:::::::::::::::::L::Q:::A:::::N::::::K:::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
rrnB0250        AESRDETGDGAEKPWAVFRQDKPGGYHTHCGDVDAASAADAEQAAIAAFTDDDPNSLWVV
HVO_A0508       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hbo3896         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       -----GEVDADDAKFGGTTDKSYRWAQTY-NINPAAEEVAASEAEQAEAEKQ-RGES
#oth            11111..11.1222.....1.1..1.211112211.1..12..2..111..211111
rrnB0250        QHQYI:::T:::VT:::::N::::F::::::V:::::::E:::S::I:::::::::I
HVO_A0508       :::::::I:::ETS:::::::T::::TS:TD:E:::P:::E::::::DV::SLEAD:
Hbo3896         ::::::::::EH::::::::::::::M:F::TGSV:::::D::H:::::::G:::::