3 genomes BUD2350 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0012 HVO_2467 Hbo2366 - - - - -

Pairwise sequence scores
Consensus score	2382	Hbo2366	rrnAC0012	HVO_2467
1686	Hbo2366	2416	1265	1237
1754	rrnAC0012	1265	2749	1243
1723	HVO_2467	1237	1243	2406

363 symbols
consensus       ------------------------------------------MRAVRFHEHGGRDVLRVD
#oth            111111111111111111111111111111111111111111.......11..2...2..
Hbo2366         :::::::::::::::::::::::::::::::::::::::::::::::::::::P:::T::
rrnAC0012       MGTGPTRSLPAVSLHVPRYENHIRSRADCGERFCRYRLTHTA::::::::Y::T::::::
HVO_2467        :::::::::::::::::::::::::::::::::::::::::::::::::D:::::::Q::

consensus       DIDRPEPGAGEVLVEVAAAGVNPVDTYFREGAYDPGALPMIPGSDCAGTVAAVGERVERF
#oth            1.22.1.121..11..2..1.........1.2.21221.21..1.2....111.12.121
Hbo2366         E::E::::Y:::V:::G:::::::::::::::::VPY::FT::::F::::VG:::G::::
rrnAC0012       ::E::T::PE:::L::E::A:::::::::T:D:E::E::W::::::::::::T::::ASV
HVO_2467        ::KT:::A:::::::::::::::::::::::S:Q:F:M:::::V:V::::::::TD::G:

consensus       AEGDRVFGTGLGNDHQGTYAEQAAVPTDRLARLPDDVDLEAAAAAALVGVTAWQALVDHA
#oth            21..1111..1.1222.11..2221.122.12.112.21211112111.1...11..112
Hbo2366         SF:::::::::::GMS::::::IVS::EL:TH::EE:E:TD:::F::::T:::::::H::
rrnAC0012       T::::A:A:::::WL:::C::YVT::ESH::::::G:SA::G::V:::::::::T:::AC
HVO_2467        ::::H:V:::I:K::Y:G:::F:::::::::V:S:::::V::GG:GVA:::::R:::::G

consensus       SLEPAETVLIHGGSGGVGHVAVQLAAANGARVITTASPDYHDRLAALGADAVFDYNRDDL
#oth            12112111...........1.1...112....21.11.1..12112....2.1..2....
Hbo2366         :V::V::::::::::::::::I:::NTM::::F::S::::::K:E:::::::::::::::
rrnAC0012       ::::::RA::::::::::::::::::::::::T:::::A::NQ::D::::D::::S::::
HVO_2467        GMQLGD:::::::::::::A:::::::S:::::A::A::::::V:E::::V:L::D::::

consensus       ADAVVAAGTP---DVILDHRLDDYLQFDADVAADGARIAGIGNNDAEAGFENIGRARAKA
#oth            1111121111111.12..111.1..1...11..2.1.1211.1212122.21222212.2
Hbo2366         KRVITEV:::::::::::THM:H:::::::I:::::::I:V::DT::GS:T:::VTKS:E
rrnAC0012       :::::D::A::::::V:::::::::A:::E:::Q:::::A:::T:LA:T:::VP:C::::
HVO_2467        :::::::A:GDGV:LT:::::::::::::::::H:G:VV:::E::P:V::GLSSS::G:D

consensus       LSLQHMSMFNTPDQGAVLSRLADLMAAGELEPVVARTYDLAEAAEAHRAVRNDSFLGKLV
#oth            .12221......122.1.11.12112211211111.1...2.121.112.22.111..1.
Hbo2366         :RY:F:::::::::P::::::S::LTR:DV:::IH:::::E::G::Q:N:IH:G:V::I:
rrnAC0012       ::VH:V::::::EF::::::::T:::DD::T:::::R:::::VPA::DD:::::::::::
HVO_2467        :::TM::::::::LS:P:RE::GQ:G:::F:ID:::::::D:::::::::ME::V:::::

consensus       ITP
#oth            21.
Hbo2366         LV:
rrnAC0012       V::
HVO_2467        :::