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3 genomes BUD2357 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2176

HVO_0328

Hbo1152

- - - - -

Pairwise sequence scores
Consensus score2241 rrnAC2176 HVO_0328 Hbo1152
1630rrnAC2176 2300 1210 1201
1754HVO_0328 1210 2224 1315
1662Hbo1152 1201 1315 2207

302 symbols
consensus       -MLESVAVTGGTGRIGPTVVAHLRAAGYRVVNLSR-HCDEAEADADIRADALDAGELYGA
#oth            11211......1.21.11.111.221..111.1..12221221.11212121.1.1111.
rrnAC2176       ::P::::::::N::::KH:LD::TT::::T:::::GK::::HS::Y:KT:L:::::::::
HVO_0328        MS:::::::::::NL::::::::::S::T:T::::::SESSL::H:Y:VS:::P:D:TA:
Hbo1152         ::TST::::::::K:::::::A:QS:::::::I:::SGG:T:::::L:::MT::::A:::

consensus       LADADADAVVHLGMISTPDNDPGHRVFESNVMSTYNVLEAAAALGIDTVVLASSLSAIGG
#oth            1122...11....111..121..1111...11.1.2..11.21.11.1.11...2..1.1
rrnAC2176       ::KS:::T:::::::P:::QT::Y:TY::::::S:H:::::GE::::::A::::F:::::
HVO_0328        :S:V:::::::::T::::T::::::::::::Q:::V:::V:::::::R::V:::M:::::
Hbo1152         F:T:::::I:::::L::::H::::V:::::A:::::::Q::E::DV:::::::::::V:A

consensus       SFEPDPIRIDYLPIDESHRATPSNPYGMGKQVLEQTADGFARRA-DAPETIASLRFPWMP
#oth            1...1111211..2..1.121...1.11..211.21.1..11.2111.1.11.1....11
rrnAC2176       G::::L:TV:::::::D::L::::::A::::T::IA:::::::ST::::::T::::::VV
HVO_0328        ::::::A:::F::V:::::::::::::L::Y:A::::A::V:::::::::V:::::::::
Hbo1152         ::::E:::LS:::L::::PVS:::S:::::H:::V::::::H:Q:NG:R::::I::::::

consensus       DDEQARETFAEADRTLAGLRNSGHFHTARNTLFAYLGREDAAALVRAAIEADFAGHERFW
#oth            2112211..21...112.1.211..1.1...112.1221..12..12.2..1.1...111
rrnAC2176       ::DL:Q:::V::::::::::::D::::Q::::CG:VHVT::V:::E:::::S::::::L:
HVO_0328        SE:EG:Q:::::::S:S:::DA:::::::::::S::::::::R:::R:L::::::::V::
Hbo1152         T:::M::::DH::::PD:V:E::::E:::::V::::SQ::::E:::L:V::::E:::::F

consensus       ASAPDTSADVPSAELAAEVYPDAECR----RDGSGYEALISTEKAKRLLGWEPTWSWRDG
#oth            11.1...1211111.1211.1.112111112221111..11.1..1.1.....111..22
rrnAC2176       V:::::::ET::::::::L:S::DY:GQTGD:::P:T:::D:T::E:::::::::N::QL
HVO_0328        :A:A:::TT:E::T::S:::::::T:::::ESL::H:::V::::::::::::::::::::
Hbo1152         :::::::::::TE::VEA::::V::K:::::EFE:::::::::::::M:::::ER:::--

consensus       A-
#oth            21
rrnAC2176       ::
HVO_0328        RA
Hbo1152         -: