3 genomes BUD2358 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0210 HVO_A0530 Hbo3554 - - - - -

Pairwise sequence scores
Consensus score	2437	Hbo3554	HVO_A0530	rrnB0210
2116	Hbo3554	2467	1878	1880
2158	HVO_A0530	1878	2430	1922
2150	rrnB0210	1880	1922	2422

324 symbols
consensus       -MENATVLVTGGTGFIGSYVAEDLIEHGHDVVAYDLSTDDRILDKLGVADDVTIRRGDVS
#oth            11222..1.......1....2211211....1...1...21..21..111..11.....1
Hbo3554         MA::::::::::::::::::SKQFL::::::I:::::::T:::E:::I:A::EV::::::
HVO_A0530       ::SSS::M:::::::::::::S::VAA::::::::R:::P::::R::::::::::::::T
rrnB0210        ::TDT::::::::::L::::V:::::::::::::::::::H::S::::D:::::::::::

consensus       DATDVIRAVRETGTTHIVHLAALLTNTARDNPRAALDVNIQGTNNVFEAARTLDDQVERV
#oth            11...22..2.1.1...........1..12....111..12..1....1..1.11.1...
Hbo3554         :::::VS::S::::::::::::::::::ES:::::MQ:::E::S::::::::::::::::
HVO_A0530       :P:::F:::::I:A:::::::::::T:::E:::::::::V::::::::T::A:PE:::::
rrnB0210        E:::::H::K::::::::::::::::::::::::G:::::K:::::::::::::::I:::

consensus       AWASSAAVYAPPHNY--GGD-FVTENDLVYPDTLYGATKEYNEHQARVYHEDYGVSHVAL
#oth            1...........1..1111112.1.21......................1.111.1..11
Hbo3554         :::::::::::::::DD:::WW:::D:::::::::::::::::::::::::E:D:::::I
HVO_A0530       ::::::::::::A::::::::::::S:::::::::::::::::::::::Y::F:::::::
rrnB0210        T::::::::::::::::A-E:Y:D::E::::::::::::::::::::::::::::D::G:

consensus       RPTVAYGPYRETGGSAFLANIIEKPALGEPFSVEYGDQVIDWQHVRDIAQAFRKATFVPE
#oth            .....................1....1..1...1....1.....11....1..1.1.111
Hbo3554         ::::::::::::::::::::::::::V::S::::::::E::::::E::::G::L:A:T:D
HVO_A0530       :::::::::::::::::::::V:::::::::::D::::::::::::::::::::::::::
rrnB0210        ::::::::::::::::::::::::::::::::::::::::::::A:::::::::::::D:

consensus       DDLSQRIYNVRGELATIREAAETVRRIIPDADLDVSDEGELPWTQRLDMTAAQADLGYDP
#oth            11....1.....1...1....11.1212....11..11.......2..1.2..2....11
Hbo3554         EE::::::::::::::V:::::::EG::::::I::::D::::::::::::K::E::::::
HVO_A0530       ::::::V:::::::::::::::::::LL:::::T::G::::::::E::V:Q:::::::::
rrnB0210        ::::::::::::V::::::::NA::E:V:::::::::::::::::N:::::::N::::EV

consensus       EYDLESGFRDYINVLRDEAGLEPL
#oth            1....1...1.111..2.2..111
Hbo3554         Q:::::::::::S::::::::D::
HVO_A0530       :::::A:::::V::::K:H::::V
rrnB0210        :::::::::S:::T::E:N:::S: