3 genomes BUD2362 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2731 HVO_2463 Hbo2361 - - - - -

Pairwise sequence scores
Consensus score	803	rrnAC2731	HVO_2463	Hbo2361
403	rrnAC2731	958	167	227
446	HVO_2463	167	691	268
490	Hbo2361	227	268	888

134 symbols
consensus       -----------------GQWEIALRLIAAAFCIVAPTLLFVGLVRGLNAMREDALVERVL
#oth            111111111111111112221222122222.1....1..11.11.1.211.1.2111111
rrnAC2731       MRRRILYVPAHCYRMPP::V:L:::V::GL:V::::::::L::W:::E:::D:E:IQQAH
HVO_2463        :::::::::::::::::----------V:G::::::S:::::F::L:D::::::::::::
Hbo2361         :::::::::::::::::MG:::TF::LLT::::::::::Y::::::::KL:::PF:::::

consensus       DRADER-DDGPAGPAGDPDMFLADASSRSSDLK----------RSGATCSRCGAPNAQDA
#oth            212112122122122221221.22211111222111111111121211.12..1..2211
rrnAC2731       Q::EM:::QPS:::DWST:TL:::E::PL:ET:::::::::::M:VV:::T::T::V:::
HVO_2463        :GV::-:G:::T:T:L::T:::RS:GE::R---:::::::::::RT:V:RE::::::T:G
Hbo2361         L:M::QFES:TRASG:P:QS::SLS:::::::PHEVTDRTSNVP::::::::::::PSY:

consensus       ARCDPCLARLRD--
#oth            22.22.11212211
rrnAC2731       SY:QS::TE:DESV
HVO_2463        G::G::G:G::-::
Hbo2361         :F::V::::IS:::