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3 genomes BUD2365 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0118

HVO_1622

Hbo1792

- - - - -

Pairwise sequence scores
Consensus score1565 rrnB0118 Hbo1792 HVO_1622
938rrnB0118 1599 674 600
1069Hbo1792 674 1528 660
1057HVO_1622 600 660 1501

214 symbols
consensus       MSSLLPLKPAAAPVRDRGLDPRLVDFDDDDAEEIISAVSSATARRILAAVYAEPRTASEL
#oth            1........22221211112.1..211.21.1112.111.2...11.111.21.211.11
rrnB0118        :::::::::TPQTAS::S:E::::::E:ES::Q:::::::T::::::SQI::::T::::I
Hbo1792         :::::::::---::DGD:T:::::S:::S:::::V:V:T:E:::E::::::E::Q:T:D:
HVO_1622        V:::::::::::S::::::S:L::EL:::::D:VL::L:::::::L:::::DD::P::::

consensus       ADALDTSVQNVSYHLDRLQDADLVEAVETWYSAQGREMAVYGPTRSALVLFAGAERTRSS
#oth            .2211111.111..11..21.21112.2..1.1.....2..1.12111..1.11111211
rrnB0118        :TE:NS::::I:::::::::::::AV::::::E:::::D::A::N::::::::::::SP:
Hbo1792         :SSV::::::::::::::KE:GV::::G::::::::::N::::KHDP:::Y:ETDQA:::
HVO_1622        ::::::TL:T:G::VE::V::E:I:P:T::V::::::::::::::::V:::::::::E:K

consensus       LSDALRRLLAGVGGVLVASVLVHIAWPAPRPQVRPAAGAPLGQAPEPGLAEAVRAFAAGP
#oth            1122.112211.121112.11112212212.2111211.12222.1.222.2122.12..
rrnB0118        :KT::S:VFGS::I:GAV:::A::RRSV:I:VSS:R:::SPV:Q:D:IMW:TLGT::T::
Hbo1792         V::T:::S::::A::::::L:::V:::T:V:-:::TR::::--S:::T:F::::G::L::
HVO_1622        ::SG::T:V::::VT::G::A:QTL:T:R:::::Y::P::T:P:::::V::F:S::L:::

consensus       GGAVLAVGIALAVLFMVGFAWGQRRAARNDAE--
#oth            .12.121.22111112112212121222221211
rrnB0118        ::V::GI::F:IL::F:AWY::TY:P:::H:HSA
Hbo1792         ::::::::L-I::F:::::RYL:SSQRGT:::::
HVO_1622        :AL:FL::V:::::VSL:V::T::::------::