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3 genomes BUD2366 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
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rrnB0036

HVO_1920

Hbo2501

- - - - -

Pairwise sequence scores
Consensus score3938 rrnB0036 HVO_1920 Hbo2501
3302rrnB0036 3988 2735 2883
3219HVO_1920 2735 3831 2874
3351Hbo2501 2883 2874 3860

559 symbols
consensus       MIRRTLKEARGRLSKFGIACLASLAIAAAPSLAGLSLAGQYALATMFFAGILWVTGALPL
#oth            11222222222122212222222222122122211122...1....1...2...1.1...
rrnB0036        ::H:::S:VQT::V::::V::GTVL:::::TP:::::::::T::::::::T:::::T:::
HVO_1920        :::GVT:T::::F:V:TL:LV::::L:FG:::E:::TR::::::::V:::::::S:::::
Hbo2501         ------------------------------------VK::::::::::::F:::::::::

consensus       AVTALSIPVLLTALGVYDDIDTALVGFADHLIFLFIAGFMLANALQKYDIDRRIALYLMA
#oth            ....1...11...2...2.2.1..1..........1............1.......12.1
rrnB0036        :::::::::::::T:::::M:::::::::::::::M:::::::::::::::::::::T::
HVO_1920        :::::::::::::Y:::G:::P::A:::::::::::::::::::::::N:::::::W:::
Hbo2501         ::::I:::FV:::::::P:L:::::::::::::::::::::::::::::::::::::M:Y

consensus       VMGSSPRRLIGAVMLATAFLSMWVSNTATTAMMTPIALGVLAQVLGREEVAAAA------
#oth            1........11.1.11..1..........1.......1...2...11.1.2112111111
rrnB0036        R:::::::::::::IS::G::::::::::A:::::::V:::S:::SS:G:::VG::::::
HVO_1920        ::::::::::L:I:::::::::::::::::::::::::::::::::::::YE:D::::::
Hbo2501         :::::::::V:::::::::::::::::::::::::::::::T::::::::K:::DDPSAD

consensus       -----------EDRDEGAASDTAADGGIAD---ADSFTNMQIAMLLGTAYAASVGGVGTL
#oth            1111111111112222122122.21.1222111211.1.1..21.........1.....1
rrnB0036        ::::::::::::STP:::::G::T::::GT:::::E::::::G::::::::::I:::::I
HVO_1920        :::::::::::-----------::E:----:::--::S:::::T::::::::::::::::
Hbo2501         IDSSVAADSRS::::S:TS::V:S:::L::TTRS:::::L::S:::::::::::::::::

consensus       IGTPPNAVLAGQLNAILGYEIGFVDWLLIGLPIVAITLPIVWYLLTFRIYPPQIDDVDDA
#oth            .......1111..111...1...12...1...1.21...1......112...2111.12.
rrnB0036        :::::::::V::::::::::::::::::::::V:F::::L::::::YVL:::::NN::E:
HVO_1920        ::::::::V:T::::L:::D:::AE:::V:::::::::::::::::::F:::EV:::EG:
Hbo2501         :::::::I:::::DK:::::::::Q:::::::::IV::::::::::::::::K:::::::

consensus       RAQARAYLADEGALSTRGRRVAIIFAATAGLWVLGGLGGFFADYLPAAWATTLFG-GEGA
#oth            121.22..21.12.11..1...1..21..........1211221.112121.1..112.2
rrnB0036        Q:::Q:::D::DS:DP:::::::::G::::::::::::T:L:P::::V:L:::::::S:M
HVO_1920        :E:::E::::::::::::::::Y:::V::::::::::DLA:EGV:SDQVFN::::TA::T
Hbo2501         :DE:GR::RQ::P:::::K::::::T:::::::::::::::S::::::::::I::::K::

consensus       TILGVEGHQGLLYYVMVGLAAIPALVLADTMEWDELVDIDWGTILLFGGGISLADALAAT
#oth            .21.1.............221...............1......1.......1....1.2.
rrnB0036        ::F:L:::::::::::::VM:::::::::::::::::::::::L::::::::::::::N:
HVO_1920        :L::::::::::::::::MVS:::::::::::::::::::::::::::::::::::F:S:
Hbo2501         :V::::::::::::::::::::::::::::::::::A::::::::::::::A::::::::

consensus       GATRWIANTVFGSLTGAPIVLVVGAVVLLVIFLTEMTSNTATATIIVPILIGIGSVFAAT
#oth            .1.2.1.11...1...1.11.11111..111...........11.1..1...1.11..1.
rrnB0036        :T:E::::::::G:::M:V::IIA::::V:V:::::::::::T::L::::::L:::::::
HVO_1920        :::::L:EA::::::::::::::::I::::::::::::::::::::::V:::::::::::
Hbo2501         :::N:::::::::::::::L::::V::::I:::::::::::::S::::::::::GI::T:

consensus       LGLTEVSAAIFLSVSGAIAASFAFALPVATPPNAIVFGSGYIKQSHMMRAGVILNIVMTA
#oth            ...11111.1..1....1..................1...1.1.1..1.1.11..2...1
rrnB0036        ::::DFKT::::::::::::::::::::::::::::Y::::::::::L:T::::::::::
HVO_1920        :::::::::V::A:::::::::::::::::::::::::::H::::::::::AV::V:::G
Hbo2501         :::A:::::::::::::V::::::::::::::::::::::::Q:E::::::::::L::::

consensus       VLTGLIWLLFQFVWPAILW
#oth            ...2...11.1....12..
rrnB0036        ::::::::::T::::HL::
HVO_1920        :::I:::F::::::::F::
Hbo2501         :::V::::M::::::::::