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3 genomes BUD2374 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnB0249

HVO_A0509

Hbo3895

- - - - -

Pairwise sequence scores
Consensus score2131 HVO_A0509 rrnB0249 Hbo3895
1387HVO_A0509 2105 973 1068
1522rrnB0249 973 2123 1217
1648Hbo3895 1068 1217 2248

291 symbols
consensus       --MSEEDLGGPADLDAEEQAAIEALLRRLADDELVQAERYTEWQVRAPTLESDLSIANNA
#oth            1122221121.2..221112.2.21.2.1....2121..111..11...1...1111.2.
HVO_A0509       ::--MP:ALN:E:::::QR::L:E::F::::::Y:HG::LI:::IY::::::::AL::V:
rrnB0249        MATT:S:::::T::SE:::R:V::Q:L:::::::I::::::F::::::::::::::S:::
Hbo3895         ::::V:S:S:::::TDK::E:::L::::M::::F:L:::::::::::::I:::I::::I:

consensus       QDELGHARLWYDLLEDLGYTEADLIWERDPDDFRHSTLVELPFAEGDWADAIVRSYLYDA
#oth            ...1........11121.11.22.11.11122.1.1.1.....1......211.1.1..2
HVO_A0509       :::F:::::::::::E::H:::E:::::PA:E:::A::::::::::::::VVL:::::::
rrnB0249        ::::::::::::AVQQ:::S:ES::Y:S::S::Q:::F::::::::::::::::A::::V
Hbo3895         ::::::::::::::::F::::P::L:::::ET:::::::::::E::::::C:::::F::E

consensus       AERLRLDALENSSYARIRDRVEKVLGEEGYHLEHAQSWLDRLALDDEARRRVQAAIDRLF
#oth            ..21.12..121..22111.121111..1..1.1121..1.112221212...1.2.1.1
HVO_A0509       :::::::::VDT:::PLS:::G:::S::R::::N:::::::::-EGDS:D:::D:L::::
rrnB0249        ::DI::S:::::::ET::N:TSRIQ::::::::::E:::::M:::K::SE:::::::E:Y
Hbo3895         ::H::MT:::K:::P::::::::::::::::R::SMN::R::VSS::G:::::::T::::

consensus       PYALTLFEP---APEAEAAIDRLGIRTMTLADMREEWLETVEEFLTELGIDVPTPD----
#oth            .1..11.111112112.11.121.2..111111.2..111.2221111.2.111121111
HVO_A0509       :H::S::VE:::-::Y:D::VDN:F:::ST::L:I::::::IPY:ES::L:::E::::::
rrnB0249        ::::::::::::VGDV::D:::::::::::DE::T::ETR::S::::::F::::DV::::
Hbo3895         :::::F:::AAD:::::::::E::V::R:::::::::::::T:TM::I:::LR::EIDDE

consensus       ----ADARPEARGRDGDHTDHWDDLAADFTRAYRELGADEATRIMADRDD-
#oth            11111212.222...12.....22.2221122.111122111111212121
HVO_A0509       ::::EVE::S::::::T::::::E:::E:R:T:D::E:P:PA::GGE:V-:
rrnB0249        :::::P:T:T--:::NE:::::H::HEQM:SS::N::R:K::L::::D:E:
Hbo3895         GNVS:::L::HL::::::::::QV:FD:::E::::M:LH::::L:K:P::E