3 genomes BUD2376 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0248 HVO_A0510 Hbo3894 - - - - -

Pairwise sequence scores
Consensus score	1086	HVO_A0510	Hbo3894	rrnB0248
751	HVO_A0510	1117	613	564
891	Hbo3894	613	1069	669
834	rrnB0248	564	669	1108

153 symbols
consensus       MSSDFN-ARDDADATACAYTDY-SDGEAADGFPATGEGADGIERDVWDALYQVEDPEMPV
#oth            11.1221221122.11.2..1.1221222111.1..11.1.1.111.1...21......1
HVO_A0510       -V::VS::D:ARE::::G::E::V:::VPE:::K::V::T:V:A:I:::::EI:::::::
Hbo3894         :::E:::--::GG:KY::::::::E:KNV:::::::::::::::A::::::S:::::::I
rrnB0248        ::::YDRP:A:::::::S::::ETKDH:::DV:::::D:::::::::A::::::::::::

consensus       SIVDLGLIYAVGV---DVEDGEAR----VDMTLTYTGCPARDILEDDVREAALAVDGIDD
#oth            .........21111111111..12111111.....1.....121111121.21112.122
HVO_A0510       :::::::::D:R:VEREG::::TKTLGI:E::::::::::::Y::N::QC:I::A-:V:E
Hbo3894         :::::::::::::::::::A::::::::I:::::::::::::M::::I:::V:::E::K:
rrnB0248        :::::::::--:L:::::S::::T:::::::::::S:::::E:IL:E:E:::ES::::ET

consensus       ASVRLVWSPAWSVDMVTEAGKEALREFGLSI--
#oth            1111.111.2.1111...1.111..1..11211
HVO_A0510       :::::RFT:E:T::::::::R::::::::GV::
Hbo3894         VMLN:::::::::E:::::::QD::::::::::
rrnB0248        :::::::::D::I:L:::Q::::::D::M:FDG