3 genomes BUD2397 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC2144 HVO_A0481 - Hmu0302 - - - -

Pairwise sequence scores
Consensus score	2571	HVO_A0481	rrnAC2144	Hmu0302
1758	HVO_A0481	3121	1276	1271
1797	rrnAC2144	1276	2606	1369
1917	Hmu0302	1271	1369	2582

422 symbols
consensus       --------------------------------------------------METRKIQTVG
#oth            11111111111111111111111111111111111111111111111111.11....1.1
HVO_A0481       VATVLDDLRPSKPDSRRRRSLFVSRITRRVGGGVTAELARRQHDFRHANT:::::::Q:S
rrnAC2144       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
Hmu0302         :::::::::::::::::::::::::::::::::::::::::::::::::::DS:::::::

consensus       GGTYTVSLPKEWAREENCTAGTVVDLHTHIDGLLVIQAPECRDDAANRVTVAV-------
#oth            1..1.....11..221221..11.1....2..2..1111.221122211112.1111111
HVO_A0481       N::F:::::R:::DG:GI:::::::::::L::M::::::::E:::SMQF::T:DGGDGDG
rrnAC2144       :::::::::::::ES:::::::T:N::::::::::::T::S:TTPR::::LE::::::::
Hmu0302         ::::::::::S::::QSLE::S:::::::V::V::VE:R:T-::G:G::E::::::::::

consensus       -----GDDRPAD-LEQTLRAAYAAGAEQVVLEAAGEFDDAQRRAIRRVTRNLTGVTIAEE
#oth            11111111212211..1........222.12.1212121..211121.1.111....2.1
HVO_A0481       GGGDG:::SAG:G::::::::::::SK:::V::D:T::A:::Q:V:::A:::V::::T::
rrnAC2144       ::::::N:D::E:I::L::::::::V:S::::LPDGYS:::H:::E::::::::::::::
Hmu0302         :::::E:Q::VH::::::::::::::ST:RF::::::T:::S:R:QS:::TM:::::D:R

consensus       TAAQVTVQNLLDAAEVSIRQSVRQLQFVALSMHRDATAALTGAAGLDRIADRDDQADRLA
#oth            12121..1211..2...11......1...1......1...112222.2211..11....2
HVO_A0481       SD:S:::R:V:::N:::::::::::::::V::::::::::::::P::GF:E:::R::::F
rrnAC2144       :ETH::::T::::S:::V::::::::::::::::::M::::TGTTS::WG:::E:::::H
Hmu0302         ::::I:::S:V:::::::P::::::A::::::::::::::D:DG:P:-::::::::::::

consensus       AMVDRHFERGLARLDEVDALGQTRPELFRLWRTARELERVADHAERIATIAAALDAPPAE
#oth            ..1..1.2.1.1....1....21....121121.2.......1....112.211221122
HVO_A0481       :::::::T:::D:::::::::E::::::::HTA:::::::::Q:::::AV:S:VPD:LPP
rrnAC2144       ::I::Y::::::::::I::::L::::::T::G::N::::::::::::G:::DQ::GQ:TG
Hmu0302         :::::::G:A::::::::::::R::::LDC::::C::::::::::::::T::::E:::::

consensus       SVADALEDLAQRVRTVVEDAVRVAIDRAAADAARDALAARDAVRERATAIERRLFEEADA
#oth            112111211.12111111.1.2.221222211..22.22.12..1221221.1.1121.2
HVO_A0481       A:::EVSE::EV:PEALD:::Q::L:GEDP::::E::S:::R:::GVGKV:::::::::P
rrnAC2144       :IVT::::I::D:::::::::::I:GD:CV:T::QT::T:R:::QQI:SLD:Q:::SG::
Hmu0302         ::-:::T:::::A::::::G:G:VV::T::G::::V:DR::G::::::::::::VDG::G

consensus       D----YRLARALDSLARTAEHGGNIAEAGLRGAVRRGALDARDARENGAEGESADAAQRA
#oth            .11111.1211.11.2.....1..1..2...2...2122121222221212212212221
HVO_A0481       :VDVDH:F:H::HA:E:::::V::V::V:::T:::THNM:E:PT::::S:S:::EHS:::
rrnAC2144       ::::::::T::::::::::::::::::F:::M:::D:::T:SEGGTDD:DTT:ST:ETES
Hmu0302         ::::::::V:V::::R:::::::::::::::::::::--:H:::FHS:P::SAV:::SD:

consensus       --
#oth            11
HVO_A0481       ::
rrnAC2144       ::
Hmu0302         GS