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3 genomes BUD2401 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2296

HVO_0279

-

Hmu0195

- - - -

Pairwise sequence scores
Consensus score4675 HVO_0279 rrnAC2296 Hmu0195
2416HVO_0279 4556 1989 2046
4059rrnAC2296 1989 4661 3788
4143Hmu0195 2046 3788 4655

592 symbols
consensus       --MSRHLKCAPHEGDVRFTIGVHPDPAVDDYGLKPYYAMDSLRKEWGDRWQTQGKPTRDI
#oth            1111121111......111211111121211..1..1.11.12.111.1.1.2.....11
HVO_0279        MTAAPFIDPQ::::::HLIF--------:E::::::F:L::V::DY-:G:::T:::::KV
rrnAC2296       ::::::::::::::::::::::::::G:P:::::::::::::I:::::::E:E:::::::
Hmu0195         :::::Y:::::::::::::V::::::::Q:H::A:::::H::M:::::::::::::::::

consensus       ELAGQTWATAFDYSESGLDPWDNPDFQIQNVREFQFYFVAKDSPHYDGEPADQDARIKGG
#oth            222111.1111..12111.11.11211112.11.11....1..12.2111..112.21..
HVO_0279        SWRN:::HL:Y::DVQPI::R:HE:Y:L:T:PL:RI::::D::-L::D:::::S::TT::
rrnAC2296       ::::E::::C:::::::::A::::E:::::::::::::::::::T:E:KR::R:K:V:::
Hmu0195         GFN::Q::::::::K:::::::::S:E:EE::::::::::::::::S:::::::P:::::

consensus       TITVRPRWPNLTADGKPV-SVPNYGEPYIDVQVQASNIPHERYLDLVQRVMDAYGISARY
#oth            .1.1.....11.2..1..111.21.1..1...1.....1.12.12..11111.1.112..
HVO_0279        :M:I:::::DM:K:::::RGI::L:G::L:::I:::::D:HL:H::::TA:E:F:V:R::
rrnAC2296       :::::::::::::::E::::::Q:::::::::::::::::::::S::K::::::::A:::
Hmu0195         ::::::::::::S:::::::::D::::::::::::::::::K::T:::::I::::::S::

consensus       FDQPHPDSHVNDLAYYVRLHREASGPLYAPDGPIARCHTLIQGDRSGYRKHVEDNTKLPG
#oth            .11..11.112...1....2.12..11.........1.1111111....1.1..11.1..
HVO_0279        :QT::EM:N:Q:::V::::S::H::AI:::::::::T:SVMTSGM::::M:K::HR:I::
rrnAC2296       :::::::::I::::::::::::D:::::::::::::::::::::::::::::::::::::
Hmu0195         ::::::::::S::::::::Y:D::::::::::::::::::::::::::::::::::::::

consensus       YYVTATVEDEKADDLVRGHGLGKELKHYYPNHPDNYEPDDAPYHPKFEVSYQTSRTDDTV
#oth            ...11111..1.1211...1....1.....11.121111211.1..1...1...1.12..
HVO_0279        :::STHIT::R:G:II:::R::::A:::::LN:EQFDE:HPL:N::V:::L:::I::E::
rrnAC2296       :::::::::::::Q:::::::::::::::::::::::::Q::::::::::::::::EQ::
Hmu0195         :::::::::::::E::::::::::::::::::::E:::G:::::::::::::::::::::

consensus       RWSDLDDARRELEETILNCLDWAGLATRADSEVFVEFDPHWNAE-DTTEARKLVDCPLPE
#oth            1.1.....1...1..1..1.2.2.11.2.1121.111.12122111.111.11.2....1
HVO_0279        Y:::::::L:::D::L::Y:S::::T::::D:::-:S:V:FD::SE:RRS:R::::::::
rrnAC2296       ::D:::::::::::::::::::C::::S:E:S:::D:::F::IR::::::::F:Q::::K
Hmu0195         ::::::::::::::::::::E:T:I::T:::GA::::::Y:SV:::::::::::K:::::

consensus       IEDEQEHRVMRLWGDMKTADRDVTELLLTDGGKVSPQEAAERTGYTYRTIRTVINRCEGL
#oth            ...1...1..21....211...1.11.11...1111111..2..11...1.1112.2..1
HVO_0279        :::::::V:::I::::::S:::F:RS:IE:::TPTRE:L:::::WS:::V:RYV:::::I
rrnAC2296       :::D::::::Q:::::T::::::::::::::::::::K:::K::::::::::::Q:M:::
Hmu0195         ::::::::::H:::::SR:::::::::::::::::::::::Q::::::::::::D:L:::

consensus       IAHTYGEMELESKKIQQELLKRVRAAGERFEQAIGSAVMDLADAAEERRRSRWSRIRREY
#oth            12111.11.12..11.11..1.....111..12211.1.21....1112111.111111.
HVO_0279        V:DAA:KL:IG::HM:NM::S:::::A:N::T:MED:::TA::::AG::::E::E:KNR:
rrnAC2296       :E::::::::S::::::::::::::::D::::E::::T:E::::::::S::::A::::::
Hmu0195         :H::::::::::::::::::::::::::::::SV:::::::::::::QEKT::::L::::

consensus       AITVREADDCRKLLQVGYRPADREEARDIMREIKTAYTQAVERNTYGVHVVVTYADGARD
#oth            .111212.11.111211.2.2.21112211.1111.1122112111111.1.11112212
HVO_0279        :AR:V:H:CR:DEIH:E:::T:W:NRT:ML:D::R:---:RD:W:SLRR:T:::H:HLGG
rrnAC2296       :::ETD::::::::K:::T:::F:::QT:::::Q::::EC::E:::::::::ET:ETG:E
Hmu0195         ::::::G::::::::M::Q:E::A:::E::::V::::::F::N:V:::::::::::::::

consensus       RFRDLRNAFQGA-RSGNYINREARAAERRREGFDFEAWKAAGCPPADEWRGG
#oth            111112221122111.21221121221222.1111...1.1111.1111211
HVO_0279        EHTTILSDL:LT:-T::IT:LDV:SVREKV:SV:W:::::GLPQ:TEDRDDT
rrnAC2296       :::::SK::ET:Y:::D:L-:::::::KG:::::::::R:::::::::::::
Hmu0195         :::::::V:::Q::::E::T::QQ--:::N:::N:::::::::::::::S::