3 genomes BUD2407 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0343 HVO_1812 - Hmu1199 - - - -

Pairwise sequence scores
Consensus score	2829	HVO_1812	rrnAC0343	Hmu1199
1801	HVO_1812	2856	1488	1364
2256	rrnAC0343	1488	2847	1829
2234	Hmu1199	1364	1829	2836

382 symbols
consensus       MESMDEETRRAVASAREA------LPEAVDGGRVVFGFDGYIDRVREVVADRQDPDDYER
#oth            1222.11.21.1121112111111..121121..1......2.....1.11.2111211.
HVO_1812        ::TP::T:V::AD:C::S:::::::::R::::::L::::::::::::F:SE::SA:T:::
rrnAC0343       ---::::::::::T:D::LPTSDA::D:I:T::::::::::L::::::::::I::ESH::
Hmu1199         :S:F:D::EA:::V::AQ:::::::::T:PSE:::::::::V::::::::::H:::::D:

consensus       LATLAAFGDRVNDSVAADSSLSFEWLQRGSRTGGHTSHLARAFGGWGFDPVMVGMYGDPV
#oth            12..22.11.121..1.1...1...1.2.2.....1.......1111.1.111.11.1..
HVO_1812        VP::D::AE::::::E:E:::T:::I:D:V:::::V:::::::DRM::E:GV::CL::::
rrnAC0343       ::::ES::::IDR::::::::::::::Q::::::::::::::::::S:::::::::::::
Hmu1199         :D:::G:::::H:::::::::::::::::T::::::::::::::::::::::I::::Q::

consensus       RDAFADEFGDCELHSLGQPGYTDAVEFDDGKLMLTEIGATMDLDWAELDDRLGRDRLAER
#oth            212.22..1221.11..2..1......1......1.1.21.2...1212212.21..112
HVO_1812        EEP:VE:::HLP:ET::S:::::::::G:::::::::::L:T::::GIES:V:L:::::L
rrnAC0343       H:::ET:::EY::::::E::V:::::::::::::::::D::S:::::::TAF:H:::::K
Hmu1199         ::V:::::A:::::::::::::::::::::::::I:N:T::::::SF:T:::::E::RD:

consensus       LDGAALLGTGYWSETPDLPDVADGLR-ELWDDIDDPPETVLVDPGDVRKLDADRLAAGRE
#oth            1...2.1.1...1.1.1..1.21.1112..12111....1.1....1..11111121.21
HVO_1812        V:::E:V:M:::::M:E:::::R:::E:::PTLS:::::L:L::::L::RGP:VV:::V:
rrnAC0343       ::::S::::::::::::::T:F:::::T:::G:::::::::::::::::::::::R::::
Hmu1199         ::::::::::::A::::::::L::IA:G::::::E:::::::::::::::::E::DG:TG

consensus       AIGRLDAATRVVVSANRAETRLLARAYGDDSERSFAADARAAFEALDASRFVGHGVERSH
#oth            1111.12211...11..1..22..22112211211222121211212212.11..11212
HVO_1812        QVSA::D:V::::::::Y:::Y:::LA:VE:DD-:GRESQ:::DH:GV:::A:::I:EA:
rrnAC0343       ::::::EV:D:::TS:::::GV::D::AG:A:::::D::E:V::::EPTW:::::::Q:V
Hmu1199         :::::A:K::::::::::::Q:::ET:::G::E:LE:K::TLR:TF:::L::S:::D::L

consensus       VVDAAGTADVAVPSVDDPELTTSSGDHFNAGLALARVADLDPAAAVVVGNAVAGAFVRTG
#oth            11211..22.1..111..1....1........1..2111121.211........2...11
HVO_1812        L::E::::T:G::RT:::V::::::::::::::::H:L::GR:ESL::::::::H:::::
rrnAC0343       ::T::::DS::::::S::::::::::::::::G:::I:::S:::::::::::::Y::::A
Hmu1199         :AG:D::T:::::::::::::::A:::::::::::L::GV:::G::::::::::::::S:

consensus       DPPTLAAVRAFVDEYLDKF---
#oth            21.12221...111.121.111
HVO_1812        S:::YDEL:::ASG:::Y:DAA
rrnAC0343       :Q:S::D:::::::::E:::::
Hmu1199         E:::FE:::::::::GT:::::