Home |  Text search
3 genomes BUD2421 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

pNG6022

-

Hbo2842

Hmu2718

- - - -

Pairwise sequence scores
Consensus score3732 Hmu2718 pNG6022 Hbo2842
2750Hmu2718 3665 2254 2126
3129pNG6022 2254 3732 2621
2948Hbo2842 2126 2621 3460

488 symbols
consensus       MAADLVVHDALVLTVDERNRLYERGTVCVRDGDIAAVRESRAGDAEIEADHVIDGAGKLV
#oth            122.211...1.1.1.1...1111...212..2.22..2111..1111.2111..1.1..
Hmu2718         VT::F:::::V:V:::::::V::S:::V:::::::T:::::::::::D::::L::::R::
pNG6022         ::V::AI:::::::A:::::::::::::IT::C:EE::P:::::G:L::ST::::N::::
Hbo2842         :RP:V:::::::::::D::::FK::::I:E::E:T:::SAQD:::D:::E:T::::::::

consensus       LPGLVNAHTHLEGTPLIGAFSELDLAEMLGSMTALCNRLANGEHDYLARAGYELAALNFL
#oth            1...1...1...2.1.1....11222.12111.1.2121121.211.22..1.....11.
Hmu2718         ::::::::A:::::A:T:::::MGPV:LFAQ::P:IADM:S-:::D:L:::::::::TH:
pNG6022         M:::::::::::M::::::::::E:T:::::G:::F:::G:::FE::VE::V::::::::
Hbo2842         ::::I:::::::V::::::::D::F:::M::::::::Q::G::L::::S:::::::::::

consensus       NGGVTTVNSMDVRPALGAEAFGEAGLRGFFGPAISDLFWDRPVDAQFSRARSFVETYHDT
#oth            2.....1.1..1..11..121......111..11......2..12..11..1.1.11.11
Hmu2718         Q:::::::T:::::::::DVL::::::AVM::ML:::::::::::::EQ::::::QF:GS
pNG6022         L::::::::::A:::A::::::::::::::::::::::::Q:::Q::::::E::::::::
Hbo2842         ::::::T:::::::S::::T::::::::::::::::::::I::EE::::::::I::::::

consensus       YDGRIRATICPHDDWSCTRDLWERTADLAAEYPDLLVHTHLLELEESNEMARANGSDDSL
#oth            .....1.1...........2....1.21.1...211........11.12...1..111.1
Hmu2718         :::::S:A::::::::::::::::V::::::::EVP::::::::G::D::::::::::::
pNG6022         :::::::::::::::::::Q::::::S:::::::::::::::::::::T::::::GE::V
Hbo2842         :::::::::::::::::::E::::::EF:D:::G:::::::::::A::K:::S::::G::

consensus       ALLDAVGLLDDRLVGAHFRIADERDIRRTAEADAAVAHCPSIFCYWNPDGETQWTPVPEL
#oth            2..12....1...11..1.21..2..2.1111112......1.2.1.1.1..1....11.
Hmu2718         :::::::::::::::::::V::::::E:MSG:::G::::::::G:Y:L:P::P::::AD:
pNG6022         G:::D:::::::::A::::LG::E::Q::::::::::::::V::::::::::::::::::
Hbo2842         E::AE::::N:::L:::Y:::::D:::::::SGVS::::::::S::::::::::::::::

consensus       RAAGVDVGLGIDDHYWHDSYNMFGEARQARLAANLKRSAGQFDSMELVRMLTIEGARALG
#oth            .2...1..1.1........121.1...1...1...111.1.11..1.1....1.1.1.1.
Hmu2718         :E:::A::::L::::::::VDL:E:::S:::L:::DAG:Q:Y:::A::::::A:S:D:V:
pNG6022         ::::::::V:::::::::::S::::::::::::::::::::::::::I::::::::::::
Hbo2842         :D::::::::::::::::::::::::::::::::::::::::S:::::::::::::::::

consensus       IDDEVGSLEAGKRADIIVLDVDKPKFTPLTNVPAHVANNARPADVETVVVDGNVVVRDGV
#oth            12111.1112.1.1.211...111..1....1..111.1.211.....11..2..111.1
Hmu2718         :-ES::R:VP:A:G:L:::::EQA::::::::::QI::S::RS:::::::::E:::E:::
pNG6022         MG::I::I:::::::::L::::::::::::::::::V:::V:::::::I:::D::L:N::
Hbo2842         :::::::::V:::::ML:::::::::V::::I::::::::T::::::::I:::::::::E

consensus       IQTMDADAVRQRVNAAVERFEDETAWDLDIGGPEPPAPRDTLADAPKRGPARLLGRIAAQ
#oth            21...111.12.122...1.21112.2122122111222222212111111211212221
Hmu2718         V:::::K:::E:AT::::Q:TAA:E:::GL:T::::::::V::::::::::K:::::G::
pNG6022         PE:::S:D::::::Q:::::M:::G:E:::::S:::TSIE:VR:L:::::::::T:L:M:
Hbo2842         :::::::::TK::EH::::::::S::----------------------------------

consensus       KARDRFR-
#oth            11.11111
Hmu2718         :L::V:::
pNG6022         S:::::SF
Hbo2842         :::C:R::