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3 genomes BUD2422 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0764

-

Hbo3372

Hmu3166

- - - -

Pairwise sequence scores
Consensus score1784 Hbo3372 rrnAC0764 Hmu3166
959Hbo3372 1922 491 446
1037rrnAC0764 491 1750 531
1056Hmu3166 446 531 1634

272 symbols
consensus       MRDDAPLPDRGCVRTATRPLA--LAALVVLAGCAAAAAAG--QSDPTISIADASVEAGEE
#oth            1221222222121111111.111.122.1111221212.1111.2.12212221112112
Hbo3372         ::S::TM::V:T::::::W::AG::LS::VT:L::P:L:A::-::::VVAGGT:::E:::
rrnAC0764       :T::S::SI:::::::GT::::::V:::L:::TVP:L:::::::T:A:::ETG::A:::T
Hmu3166         --------------MT::::V::::CV::::A:L:V:P::GV::E::LT::::TL:PDGS

consensus       TTVRVALTSAPDGLAGFALRLALRNGAVATVENAEYPDRFGLTTDPDIAPDGRAVTLEAA
#oth            11.212.11..1.1..121212222121.1122.111.111111112122..221111..
Hbo3372         :::DLT::E::::V:::::TVEMT::DA:::VD::VA:E:::GEVEG::-::T::R:K::
rrnAC0764       MA:P:V::::::::::YQ:E:SVDDP:::RF:::S::::L::::::V:SS::GT::::::
Hmu3166         :::::::D:::N:::::EV:::::S:-::::GG:::::::RP:::::VG::::EI:I:::

consensus       DLNGAVEPGASNVTLATVTLRGNAAGETQLAVAAAQIDDDNGGRVNPATAPGTIAV----
#oth            ..22211..111...11.1121222.11212.22212.112.12.212.211121.1111
Hbo3372         :::KT::::::::::GS:::::QQ::::S:R:TIDRL::N::SS:::R:D:::LD:IDAA
rrnAC0764       ::D:QI:::::D::::::Q:T:V:G::::VT::SS:V:A:G::V:E:::E:TAV::::::
Hmu3166         ::ES::G::TT::::::::VEA:GT:TAL:::E:::::::D::::DLG::A:::::::::

consensus       -------NADAPTATATETDRAENTAAESGAEPARTDNAAEET----------ADAGDAG
#oth            1111111222.2.1.1111222221221112.122.121222111111111111221112
Hbo3372         GGADESD::G:V::::S::GPD:::MT:M:V::T:::D:S:::AVGAPTTNKVNE:A:::
rrnAC0764       :::::::SPS:S:E:::AMTD:SSS:S::T::S:G:A:::GT:::::::::::::S::RS
Hmu3166         :::::::--::::::P:::::RPT:D:A::G::PE::------:::::::::::SG:G:V

consensus       TTSANGPGFPGGLAAAALAAAAALLAR--RCD
#oth            .11221.112211.21112.211112.11122
Hbo3372         :A:TEV:::TV:T:LV::V::LVM:S:::WE:
rrnAC0764       :::::::-L:IA::I:::::V:::A::TS:QP
Hmu3166         ::TGT::::-::::::LAL:I::::G:::::-