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3 genomes BUD2423 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0573

-

Hbo3104

Hmu1336

- - - -

Pairwise sequence scores
Consensus score4031 rrnAC0573 Hbo3104 Hmu1336
3259rrnAC0573 4236 2654 2689
3251Hbo3104 2654 4413 2743
3288Hmu1336 2689 2743 4071

608 symbols
consensus       --------------MSEAGP---QRWVGAWSERRAALSPDREGLVDATTGARFTYAELDR
#oth            111111111111111.12..11111...2..1..11.1.112......11221..11..1
rrnAC0573       :::::::::::::::::L::GTP:K::::::::::::T::::::::::::E:::::::::
Hbo3104         MSEGNDDGLGAFLPV:D::::::N::::G::::::Q:::EKV:::::::DQS:::::::A
Hmu1336         :::::::::::::::::H::::::::::D::A::R::::::I::::::S::EY::RQ:::

consensus       RANRTARLLRRYGV----GADGEAGGRVAVISRNRPELVDLFFATAKTGGVLAPLSHRLA
#oth            ...11....121..1111122212111...2.....12......11...11.........
rrnAC0573       :::::::::::::::::::DS::ST:T:::V:::::AV::::::S::::SR:::::::::
Hbo3104         ::::::::::Q:::::::----:T:E::::::::::::::::::::::::::::::::::
Hmu1336         :::GC::::ADH::TREG:::PD:::::::L::::::F:::::::G::::::::::::::

consensus       PPELAELLDRVDPELLVVEEPF-----------------------ADDAENDSDALADAD
#oth            1..111..12.1.2...1.21111111111111111111111111.11.222121.21.1
rrnAC0573       :::::::::::::::::::---::::::::::::::::::::::::SS::TV:T::ET::
Hbo3104         A::I::::TT:::K:::I:S::VELVADARAADAFDTGPSILVLS::::G::::D:S::P
Hmu1336         ::::GT:::D:A:S:::::::::::::::::::::::::::::::::::---AE::::::

consensus       AAAP-VRHLATAADDAASAARLDAS-----LPEDR---------------SPAEGATLAP
#oth            22111122111.2222212221.21111111.2.21111111111111111.21221221
rrnAC0573       T:::QLI::G::::S:S:::T::STPYASA::::D:::::::::::::::T:V:T::P::
Hbo3104         :F:A::PTF:S:LP:D::DPSD::::::::T:S:NASTSSDDASDPSDDA::::HTDVSM
Hmu1336         IDC::::S::::--GETTWD:::E::::::::T:::::::::::::::::::YD:P::E:

consensus       ADPHLFLHTGGSTGTPKETVLTHEGIVWNSLNTITAWGLRPDDVTPMVFPMFHTGGWNVL
#oth            2.1..1.............111.11.1..12..1.....111.1..11...........1
rrnAC0573       S:T::L:::::::::::::E:::R::::::::::::::::E:::::::::::::::::::
Hbo3104         D:::::::::::::::::::::::::L:::F::::::::C:E:T:::::::::::::::I
Hmu1336         ::::::::::::::::::::VS::A::::AT::V::::::::::::LT::::::::::::

consensus       TVPLFHMGGTVVIARAFDPAAVLELIDARDATVLVAVPAVLRMMAAHDRWAETDLSTLRF
#oth            ...11.1.....1..2...22..11.2222111.1....1....22..1.1.....1..1
rrnAC0573       ::::W::::::::::::::SD:::I::SEGG::::::::I:::::N::::::::::S:::
Hbo3104         ::::::L::::::::D:::::::R::PKH::S::I:::::::::C:::D:T:::::::::
Hmu1336         :::V::::::::L::E:::GE:::::E::S::L:::::::::::VD:::::::::::::L

consensus       AKSGGGPCRESVMQAWWDRGVDLSQGYGLTECGPNNFAMPDDWPHEKADSVGVPALHVDA
#oth            1........1..121....11...................11..1....1..1.22...1
rrnAC0573       :::::::::K:::ET:::::::::::::::::::::::::E:::::::::::K:V:::::
Hbo3104         V::::::::::::::::::DI::::::::::::::::::::G:::::::::::::M::::
Hmu1336         ::::::::::::LS::::::::::::::::::::::::::::::R::::T::::NV:::V

consensus       RVV-----DDDG------NELDRGEVGELQLRSPHAAAEYWNAPEETAETF-DDGWVSTG
#oth            .1.11111..2.11111121122.1....2.11....22.122.11.11..11...11..
rrnAC0573       :::EPEDS::E:SPAGSRDPV:P:T:::::::::::::G:LDN:DA::::::G:::::::
Hbo3104         :::::::::::::::::::::-Q::::::E:SG::::RK::::::::R::::::::::::
Hmu1336         :I::::::::T:::::::V::P:::::::H:::::::T:::HR:::::A::R::::LA::

consensus       DLARVDDDGYVHIEGRKKNMFVSGGENVFPPEVEDAVAAHPKVEDAVVIPVPDDRWGQVG
#oth            ....1.1...12....1.1.11......1.1.....121..1.111..1111.11..1..
rrnAC0573       ::::::A:::YY::::T:H:::::::::::::::::I:D::M:GEV::::::::::::::
Hbo3104         ::::::::::::::::::::::::::::Y::::::::T:::::::::::GI::E::::::
Hmu1336         ::::I::::::S::::::::YI::::::::A::::::S::::::::::V::D::Q::E::

consensus       RAVVQ----------GDDSLTLDELAAFLDDRLARYKRPRDIVFVDAMPRSGPDKIDRDA
#oth            1..1211111111111.111.111.22...1....1.2.2121..211.2...1....2.
rrnAC0573       K::IEPASTAVTDGAS:RP::::D:RT::::::::::H:H::A::E:::T::::::::G:
Hbo3104         :::::::::::::::::::V:VE::S:::::::::F:Q:KSV::::E::M:::S::::Q:
Hmu1336         ::::V:::::::::::::::::::::S:::G::::::::::L:::S:L::::::::::::

consensus       VADRFGA-
#oth            12.11.21
rrnAC0573       :S::::::
Hbo3104         LK::::GG
Hmu1336         :::EY:C: