3 genomes BUD2424 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - pNG7139 - Hbo3779 Hmu1853 - - - -

Pairwise sequence scores
Consensus score	2168	Hbo3779	Hmu1853	pNG7139
1360	Hbo3779	2158	948	932
1597	Hmu1853	948	2267	1194
1545	pNG7139	932	1194	2213

312 symbols
consensus       ------------MYDEILVPTDGSEHAERAAAHGAALARAFDASIHIIAVIDLQAAGGPF
#oth            111111111111.1.21.11...111121.12.1111.1..1.121222.11211.1.11
Hbo3779         ::::::::::::::::::LT:::T:CSVQ::K::L:F:E::::AVR::T::NV:::::L:
Hmu1853         MIQGRVCPSGNT:::TV:::::::D:::::G::A:F::::::::::LLN:V:::::A::M
pNG7139         :::::::::::::F:S:::::::::::T:::E:::::::::S::L:VM::::TRT:::::

consensus       NAGGVDAAYVERLESRGEATIDAIADAAAAAGAVRTAVRRGRPSDAILAYAADHDADLIA
#oth            21.11222111111121121121121222222212.2122.2.112.12.122112..21
Hbo3779         D::::T:D:::S:::::QKM::E:::L::PTTT:::E:LK:I:::S::E::EKESF::VV
Hmu1853         ::::::E::::::::E:::::G:LEPIFEDV-P:E:::V:::::E:::D:::E:::::L:
pNG7139         SG:DLEDETLD:MTADA:D:VT::T::VD::::IQ:TI:T:N:A:E:C::RD:::I::::

consensus       MGTHGRTGVQRYLAGSVAEHVVRHADVPVLTVRAREQSRVDDSYDRILVPTDGSEAATAA
#oth            1.......12.111...2.1.1...1..11.1.1212111211112.11.....12111.
Hbo3779         L::::::::::V:T:::::::I::::::I::::E:DE-::EP:FE::::::::::Y:QQ:
Hmu1853         ::::::::LE::I::::V:::::::T:::::T::V:T:T:::G::E:VI::::::PS:::
pNG7139         :::::::::G:::::::T:S:::::::::F::::T::::KT::::D::::::::T:::::

consensus       VEHGLAIAEAFDARVHALNVVNLGDIAPGLEDTAPTDLRAALEARGERATEAIAAAARRR
#oth            ..11121.121.111..11..1212212121212.1212121112.1211.21122.122
Hbo3779         :::::SV::::::T::::Y::DT:I:::R:::HI:ETV:::::TE:KT:I::VESQ:::T
Hmu1853         :::::::::RT::::::I::::VATLSS:PDQ::::E:L:EFT::::::::E::T::AD:
pNG7139         ::PACE::AQ::S:L::::::::::V:T:S:Y:L::::IDT:::Q::KV::R:::R::ES

consensus       GVETVTQVREGFPARDILDYAEENDIDLIAMGTAGRTGLNRFLLGSTTERVIRHAPMPVL
#oth            11111.2121.1.111..1.1111.1..12..11..1..1..11......11.1112..1
Hbo3779         S:::::SLT::V:E:E::A::D:H:::::T::SH:::::D:::::::::::L:E::S:::
Hmu1853         :LDAT:T:::::::::::::V:A::A::V:::::::S:::::::::::::::::S:V::C
pNG7139         ::::::::VD::::A::::::::::::::V::::::::::::IM::::::L::::D::::

consensus       AVNARD---AEA
#oth            1.1111111112
Hbo3779         S:RKPV:::TDE
Hmu1853         :::::::::::-
pNG7139         ::::::QRV:::