Home |  Text search
3 genomes BUD2425 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3058

-

Hbo3508

Hmu2774

- - - -

Pairwise sequence scores
Consensus score3378 Hbo3508 rrnAC3058 Hmu2774
1895Hbo3508 3419 1326 1481
2536rrnAC3058 1326 3434 2110
2698Hmu2774 1481 2110 3313

481 symbols
consensus       MAMHRRVRRWNVGLAGTLFLVSVGLLAAEPALLAAAAIPLAYVLYGALSRLPAGANLDAR
#oth            22221.11..211.11112.1111.12.1.2.2.111...21.11111.12.2122.212
Hbo3508         :TTL::DD::::::V:::S::GI::AY:N:T:V:::V:::T::::D:F:S::ETVE:GI:
rrnAC3058       --::::::::SG:::AA::::::S::T:::L::::T::::I::A::::::M:::TD:Q:T
Hmu2774         V:VTD:::::G:P::::VT:L:::::::::::F:G::::::S::V:S:::V:S::::::D

consensus       REVAAAAPTPGEPVAVTLTVENT---------------GRRTLTDVRVVDGVPAELAVVS
#oth            .212211.1..11.2.1..11.1111111111111111.211.....11....11.2.11
Hbo3508         ::FDPV::A:::R:T:::::::SSATESSSATDDASDD:G::::::::::::::A:::E:
rrnAC3058       :S:SD:Q:::::::::E::LT::::::::::::::::::SSS::::::I::::E::P::E
Hmu2774         :T:::::::::D::D::::::::::::::::::::::::::::::::I::::::::T:::

consensus       GSPRACRSLRPGESATVEYAVRAKRGTYAFDDAAVRIRPLAATDEATADVAVAGDEALTC
#oth            ....112..1.1.12.12.1.211..111.1112..2.21111222.221112..22.1.
Hbo3508         :::::SL::A:::TE::T:D:V:T::DF:::::L::L:SV:G:SVL:SE:::G:::V:S:
rrnAC3058       ::::L:T::::D::::LS:::M::::::T::A::::V:T:S:S::V:V:LP::::GT:::
Hmu2774         ::::::::::::::T:::::::S:::::::E:PV:::::::::EI:::T::AT::T::::

consensus       SNGVAEAPLADATLPRAGTLPTDSGGSGLEFHSTRDYQSGDPVSRIDWRRLAKTGELTTV
#oth            112121112.1..11....1.1.1........1..2.11...11.1...11...1....1
Hbo3508         :G:LTD:SV:E::PC::::V:A:::::::::::::E:R::::L::V:::H::::::::::
rrnAC3058       ::T:S:V:M::::::::::::::T:::::::::::S::P::::N::::::Y:::D::::I
Hmu2774         A:V:::::::::::::::::::::::::::::A:::::::::::::::::::::::::::

consensus       EYREEQAVRTVLVVDARPPARVTPEPGRPTGAELSAYAAERLHDALSRDSVVASVTAVGL
#oth            11..1..1.111.1...1.2.11111.2..1...1....1.1211.1121111111.1..
Hbo3508         :F::Q::S:VAV:A:::E:M:AVAG:::::A:::C::::L:T:RT:TA:GHDVAA::L::
rrnAC3058       D::::::::::::::::::::::::::F::::::::::::::F:::::T::::::C::::
Hmu2774         :::::::::::::::::::T:::::A:Y::::::::::::::L:::::S:::::::::::

consensus       ASEDLPGGL--GPDGLAWADPDGGREAAQARAIFDAVQRAAARDSDAADAG--DVSDDDQ
#oth            11112111111.....1.2111.121222.222..2122...12121222.112122212
Hbo3508         D:VEF:DAVAV:::::P:--:::P::---:E:M:::ASV:::ETATT:TD:::G:V:S:S
rrnAC3058       ::::V:::::::::::::V:AS::HA::H::Q:::S:G:::::Q:::DS::DA:::E:::
Hmu2774         :D:::V::::::::::::::::::V:SP::SRL::G::S::::::V:P:G:::-------

consensus       EEREGAEAPRAATV-------PAAAALLARLPPTAQVVVFSPLLDDWPAELARSLRAREY
#oth            211212122112.111111111222211...111.11.1...111.1.22.221.12.21
Hbo3508         :R:GVSRDS::::::::::::--::T:D:::ASD:RI:L:::::::Y::T:::A::R:GR
rrnAC3058       P:QP:G::T::T:ADGGTIED::LL:V:::::::::::::::AAG:::VS:VS::SV:::
Hmu2774         -::::::T:TDR::::::::::DIQS::::::::::::::::::::::T::IT:::::S:

consensus       PTTVVSPDVTRGEGPGAAVASLERTARLQAAELTGATVIDWDLDRPIDDALRASLADLFN
#oth            11111..1111112112111111.12.1122.1111.11..1112.1.211111.11112
Hbo3508         SVA:L:::::GR:T::L:L:::D::R:RT:L:R:DV::A::TPE::L::S:SHV:T:---
rrnAC3058       :::L:::SLA::DSL::::::T:::::::R:::S::::::::::S:::V::::::::::S
Hmu2774         :::::::::::::::AQT:VA:::RL:::SV::::::L::::::E:::I:M:::::E:::

consensus       R
#oth            1
Hbo3508         :
rrnAC3058       V
Hmu2774         :