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3 genomes BUD2427 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3060

-

Hbo3507

Hmu2775

- - - -

Pairwise sequence scores
Consensus score3894 Hbo3507 rrnAC3060 Hmu2775
1757Hbo3507 3852 713 696
2327rrnAC3060 713 3850 1336
2284Hmu2775 696 1336 3835

562 symbols
consensus       -------DIDDTDAAPPRMNWRPTAASIALVICVTALLAAGLLGAIQAARAALLGAAGAV
#oth            11111112211122212122.11122.212.221.111222.211222221112121111
Hbo3507         MTDSPLS:LET::::::AS::::::L:::V:L:C::I:GGL:T::T:LWN:V:PA:G::A
rrnAC3060       :::::::-M:::ISL:T::P:----T:L:T::G:::::V:::::TVS:D::::V:V:TG:
Hmu2775         :::::::M:::------:TE::::T::TG::VF::L:T:TV:VR::GV:VP:A::G::::

consensus       LLALAIWLAGWDRHRALGTVLASCLALPAAVGVVAATGGTVAKLAGELFPVESQARLRAA
#oth            1..112111111121211111112.1..221.11111111122121221..2.2222222
Hbo3507         :::G::S::AATAY:P:SRFV:A::L:::SA::::GL:YVF::QL:GTY::G:-------
rrnAC3060       ::::SL::S::::WQ:V::::::V::::V:::LSL::::::VS:GA:::::T:::GV:P:
Hmu2775         A::::V:T:::::::T:::::T:L::::IG:::::::V:::IV:::VF:::::LS::P:T

consensus       VVDLLARVIVVVGAAAAVFGAAAAIRDVLDRDAARRAAAVALRTTAPP------LAVALV
#oth            112122212..11221.1...21.21211121222222212221121.111111111211
Hbo3507         -------:F:::SLT::G::::::V::T:ES::LES:L:::TVASL::TFAFVP::IVRI
rrnAC3060       ::T::SQ::::L:CLT:::::T::T:G:V:TERVGTYGG:VV::::V:::::::F:::::
Hmu2775         ::::S::AM::::::::::::SV::GH:::::T:::T:EAS:K::I:::::::::G:G::

consensus       LEAREALRYLQSNADAP-GVAALLGAALRRVLRFIFAPPAERPHIAIFALLCALAAAALA
#oth            12222.2211212222.1112122.221221122212.222111222.2.1211.22212
Hbo3507         F:EFS:TL:VPVLVPD:VPA::FP::LVGG::::LV::TH:G::LFS:::V:Y::VIG:E
rrnAC3060       :FT:G:VDF:::::GT::::QQ:T:E::T:::EP::D:VPG:T:::::S::L::::::::
Hmu2775         :V:S::::::E:TR::::::G:V::DV::TATTVV:E:::V::SVTT:L::V:A:LLVVR

consensus       RGLRALPLAELVRD-NDAPAVDRAVAPVRRGLRWAGRLALLVAFGLPVAFLADRGFGQAR
#oth            121211.121.12212221111.1112121222122111211212211211222112222
Hbo3507         TV::TY:V:D:::P::KPE:A::VLD:LK:::TA:TT:GT::V:I:GIL:::P:::----
rrnAC3060       :::D::::S:::PETS:::D::::::V:E:TF::T::::::::---:::G:FEL:L:::S
Hmu2775         :TVG::::T::TT::---:::E::::S::---S:LL:A:VVAG::V::G:FT:YV:PPE:

consensus       LAELLPAGALDLITAVTGAPGLRRLLWRGGVLGIALGVAVWGLRRTAQASADRIGAALAP
#oth            1222111222.22111121121.2111222121222211112...121211.12122211
Hbo3507         --:M:::TI::PV:TLA:VDI::VV:FL:::V::L::IGS:::::FYD::K:ELRKSTPS
rrnAC3060       ::G:::::LY:F:V:::V:::::G:::WLFLS:TVVS::::F::::V:S::::V:TV:::
Hmu2775         :QSVVTPP:F::L::::T::PA:::A::VI::CV:TL:::AV::::::TA:::::::V::

consensus       LVAGSAVLIAAAAVAGPVLDAARDAIAATLPAAAAEQFREQADAVLDFYGPEPVVLALAA
#oth            211.121221122111.112.222122111111222112222221211..11211.2122
Hbo3507         :::::::V:G:FTLHE:::T:LL:::LDV::::Y:GDVQT:::::MA:::G:V:::G:C:
rrnAC3060       Y:G:GVITL:VV:::::AV::IET:LR::PA:::V:::FV---PI::V::::T:T::::V
Hmu2775         FA:::G::V:::L::::::S:::GWV:::::GEFGP::::LSGS:V:::::V:I::TGVG

consensus       GALFVAAVVAACLSGVLATNYLRDRTAGVAIAAAGLFVASAFAATVGAPTALVLAGLVGA
#oth            22.111111122.22112121121.1..122.211..111.1.111121.2.11.1..11
Hbo3507         :L::::::AF:V:Y::VNIGVMT::A::A:V:G::::::::V::::::G:T::::::::G
rrnAC3060       V:::SLIS::GQ::VA:::::::E:::::TL::::::G:::::::LST::W:::::::::
Hmu2775         FV:L::::::M::WL::L:K::D::::::G::SGA:::VA:::GV::V::::LF:S::A:

consensus       VIVWDAGEFGTTLGHEIGRRAATRRAELVHTAGTAAVGGVGAAAAVGLADAARGAIAVAD
#oth            12.1.1.21.1...1.1.1212...1....121.211.1.1111111121212.212121
Hbo3507         L::R:::TH:V::::::::LGE::::::::L:V::I::V:A:I:::::::F-L:R:PAL:
rrnAC3060       :V:::::S::::::::V:SG:::::T:::::G::V:::::::::TA::SGV:::S:::EP
Hmu2775         :L:::V::::::::E::::::D:::::::::T::L:I::::V:V::AVT:::V::VT:::

consensus       GAAVAGLVVALAGALALVAAIR
#oth            12211..111121211112121
Hbo3507         :---S::SL::G::VLG:----
rrnAC3060       SV:::::::C:VAV::::::::
Hmu2775         ::V:::::::V::L:::LV:L: