3 genomes BUD2431 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3527 - Hbo2979 Hmu0995 - - - -

Pairwise sequence scores
Consensus score	1455	Hbo2979	rrnAC3527	Hmu0995
733	Hbo2979	1427	570	536
1160	rrnAC3527	570	1458	949
1142	Hmu0995	536	949	1505

201 symbols
consensus       ----GSNADATQASAADDDLSKGEIFDVLQNRRRRYAIQYLREHDGPVQLGDLADHVAAQ
#oth            1111212222122122112.111...1111.2....211.11112...2.11.121..12
Hbo2979         MGGS:PGTLL:EQ:DD::E:HRD::::LIS::::::::R:CK:AT:::S:S:::E::::W
rrnAC3527       ::::M:KQVKRSD::::::::::::::::::E::::TL:::::::::::::::VS:::::
Hmu0995         ::::V::::::::TGTPRT:::::::E::::K::::V:::::R:G:::E::E:::Y::SL

consensus       EYDCPNTAVTSAQRKRVYTTLQQTHLPRMDRAGIIAYDAEDGEIQLTARTDDLTVYLEIV
#oth            .11112121..21..1...1...1...11.21..1211211.2122.22122.11..1..
Hbo2979         :HEKTVEEI::RE::S:::S::::::::L::::::EF--::::VE::D:IQS:DI::D::
rrnAC3527       :::::::::::::::::::::::S::::::ET:::N::D:N:T:SK::H:EE::::::::
Hmu0995         :::::Q:N:::T:::::::::::::::K::K:::V::::D::V::T:PQ:::::::::::

consensus       PGNEFPWREYYLSLGAVSLAIIAALWLGVLPFTAIPPLVWATLIAVILTVSAAYHTVAGR
#oth            .12111.111..11111.11.112..11.2.112111..11..11121111.2...1211
Hbo2979         :E:SVS:GV:::G:SVL:CV:::::::E:::TDS::M::YP:::V:LF::::V::::DNY
rrnAC3527       ::S::::::::::::::::::VTI::V::Y::::::::::::::::V:S:::G:::Y:::
Hmu0995         ::G::::::F:::F:::::::::T:::::F:::MVS:::::::F:A:::AA::::::S::

consensus       RMTLTEYDAA----DAEADD-
#oth            21111.122211112212121
Hbo2979         :YRFD:IEQE::::------:
rrnAC3527       E::::::V:Q::::E::S:::
Hmu0995         T:::::::E:VDDC:G:::EE