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3 genomes BUD2462 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG6145

pNG6104

rrnAC1062

- - -

Hut2389

- - -

Pairwise sequence scores
Consensus score2541 VNG6145 rrnAC1062 pNG6104 Hut2389
959VNG6145 2865 618 638 573
1731rrnAC1062 618 2534 1445 1339
2015pNG6104 638 1445 2542 1710
1902Hut2389 573 1339 1710 2543

383 symbols
consensus       -MSNATDPAKRIPKSLGTDTQLLGSYSLTDLAVAGLPAVAVVLLTQVVIPSSLAVAGIT-
#oth            1123312111..1111.111221121212123.22111131112212131221311.321
VNG6145         MSIDQDAA:R::MDQF:EESR-IP:LNIEEGD:GV:I:FPI:---------G:F:::L:G
rrnAC1062       ::AER:-:S:::::::::E:K:::::T:G:AV:VL:::::::::V:L:V:::TRI::Y::
pNG6104         :::S:::::::::::::::::F::K::::::::::::G:L:::V::::::P::T:R::P:
Hut2389         ::::G:::S:::::::::::::::Q::::::I:::M:G:I:I::::::L::D:::::VS:

consensus       VQALTIPLAAGAIAFGAAFVYLTPGYTNSLDWLEDFVRF----------------HTNET
#oth            132121.21131121.231..11.2111111.1332221111111111111111112311
VNG6145         IES:AL:FV::GFG::V:I::VS:DHL:AWT:TK:VY:YVKRPQITFSSPEEANSS::::
rrnAC1062       :::ILL:IV:V::CV::V:::V::A::S:::::VTML::::::::::::::::::::TV:
pNG6104         :S::::::::I:::::GL:::::::::::::::GL::N::::::::::::::::::RS::
Hut2389         :TV::::::VLG::V::T::::::::::::::::Q::G::::::::::::::::::QG:S

consensus       E------------EPHEEAKDYTRVERVYPRADAIERTDGALVGAVRVSPPTMALATDDE
#oth            1111111111111321121212132..12.322112.2.1122121312.22.11.1112
VNG6145         :RNEGGLANYTPFK:D:RTQ:L:NI::AW:G:G::Q:A::TMEAFIEID:DN:DF:MS:D
rrnAC1062       ::::::::::::::::S::L:HHQL:::::D:NV:::Q:::VI:L::::::S::::::E:
pNG6104         :::::::::::::IA:::::E::H:::::::Q:::::::R::::::Q:::::::::::E:
Hut2389         N::::::::::::LD::Q::E:::::::L:EH::VV::::::::::H:E:A::::::::Q

consensus       WAQKADAFQDFVNTTVEFPIQIYSTTQSFPAEEYLEAYEERLADPDVKANPQLRALIEHY
#oth            .122111111.2.11121121211..12..1121223112..3.1..23.23122.1.2.
VNG6145         :::LQ::GEE:A:KELDSELKLHA::R:::V:QIT:TI::::T:E::TE::IF:E:L:E:
rrnAC1062       ::TT::S::::L::::T::::::::::P::V:T::DH:R:::::::::T:T:::T:::R:
pNG6104         :::::E:::::::::::::::::::::A:::D::VGR::D::S:::::S:EK:Q::::::
Hut2389         :QA::E:::::::::::::V:F:::::::::::::::::S::G::::E:::E:E::::::

consensus       VEWYERELAARQMTIRDHYVGVPVSPEEV--RFEREGL-LEKLARIPVIGILVRAATAPP
#oth            2211231123.1111111.1312.2.2..111111212122112331.1.3122231211
VNG6145         R:TRPK:MRD:GIQQVRY:I::Q:::I::YD::RD::TPA:::TQF::::F:FNPFVTRR
rrnAC1062       I::::QD:::::::::::::I:T::::::::Q::::SI::AT:SGV::L:VF:::L::::
pNG6104         :D::D::::Q::::::::::LI::R:::::::Y::AS:::::::::::L:::IQIV::::
Hut2389         :A:::D::VR::::::::::V:::T:A::::::::D:::VQ:I:DLR:::T::::::S::

consensus       EE----EERAAMFEELDERLRRVERG-IRGIEGCNARRCDAAELTRLIAEFWAGRELEYG
#oth            22111122.111212.11.221.2111112111231223113122211311.2.222111
VNG6145         :DLTDV:R::Q:::K::S:VND:RSEF:QQAS:WS:::LGTV::FV:NMD::N:::HD:D
rrnAC1062       P:::::RQ:E:L:TT:E:::S::QS::::D::::E:MI:::SDGAQV:S:::::QT::::
pNG6104         ::::::::::::L::::::R:::::::L::::::DT:PV:::::::::::Y:T:T:I:::
Hut2389         KA::::A:::::A::::::::::::::L::::DV::S:I::T:F::V:G::::::D::H:

consensus       DAERVLRTRPLIGDSR-------
#oth            131322.13.2113132111111
VNG6145         E::::V:EQ:I::H::REDAHDA
rrnAC1062       :F:EI::::::V::RS:::::::
pNG6104         :P:Q::::S:V:NK:-:::::::
Hut2389         :LAHRI::T::V:G:DA::::::