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3 genomes BUD2469 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1113

HVO_2087

- -

Hut0492

- - -

Pairwise sequence scores
Consensus score5328 Hut0492 rrnAC1113 HVO_2087
3484Hut0492 5692 2740 2471
4220rrnAC1113 2740 5476 3114
3806HVO_2087 2471 3114 5311

784 symbols
consensus       -----MDTADDRIEAVIDRLTLEEKIALVHGADDPDGTATGYLPGVERLGIPEFRLVDGP
#oth            1111122122121.21211.1111.121.1.12..111...1.1..1111..21111...
Hut0492         MATQDP::TT::::SL::::::::::DF:::E::::ER:::F:::::::D::SLSM::::
rrnAC1113       :::::-MAD::H::::LA::SRPQ:L:::R::T::E:::::::S:::EA:::P:::::::
HVO_2087        ::::::E::EADV:T:V:E:::::::Q:::::V:::::::::::::D:::::::::A:::

consensus       LGVRANGQRATAFPASIALAATFDPDLAREQGAAMGREAAAADQDALLAPGLNIIRVPHC
#oth            ..1.22122..1......1..11.11...1....1...12121..1..1..2.1....1.
Hut0492         ::::PG--T::::::::::::SW:V:::::::::L:::VLG::::V:::::F::::::Q:
rrnAC1113       ::I::E::::::::::::T::::::::::Q:::::::::::LG::::::::V::::::::
HVO_2087        ::::V::SP::L:::::::::::::N:::::::::::::N:R::::::G::::L::::::

consensus       GRNFEYYSEDPVLAAALAAGAIDGIQ-SADVIATAKHFVANNQETHRAEVSAEVSERALR
#oth            ..1...1....112212121211.1.11.111..2..1......11.22.121.1..1..
Hut0492         ::S::::::::Y:SSR::V:T:::V:KD:GA:::::::::::::QD:H::::::::::::
rrnAC1113       ::::::L:::::H:G:VG::L::::::::::V::V::::::::::::TT::T::D::T::
HVO_2087        :::::::::::::T::F:GA:VE:::::::::::P::Y::::::::::S:NVS:::::::

consensus       ECYLPAFRAAVDAG-VGSVMTAYNRVNGTHMSEHRRLVGDVLKDEWGFNGYVVSDWFGAE
#oth            .2...2.21..11.11....1...11.112111122.12....2....2.......2122
Hut0492         :I:::::E:::TE:E:::::A::::I:::YAT::EW:LS:::::::::S:::::::WATT
rrnAC1113       :L:::P::S:::::::::::::::::::::::D:G::::::::S::::::::::::Y:L:
HVO_2087        :::::G:K:::::::A::::::::C::DSF:::N:P::T::::G::::D::::::::::V

consensus       STVAAANAGLDVEMPGVAAPQAWEAANNRIADDAEDAEF------PDGIPDATRAGLFGD
#oth            11.21..1.1.11...122122112222222112122221111111.12.1212111112
Hut0492         DG::::::::::D:::IPV::-:HVTE:::H:VI:GL--::::::::AL:KRSI:K:VST
rrnAC1113       :::G:::::M::::::::::G:A::::SDT:::::EF:W:::::::::::::::::::::
HVO_2087        :::ES::G:::L:::::TRDEL::MFDLEPPE:DD::V:GETADVS::M::M:NT:N::G

consensus       P-------------------LREAVERGDVPAARLDDMVRRVLGQMNRFGRLDGERA---
#oth            .1111111111111111111.11.112.2.1221..1111.1.1..2.1.2111212111
Hut0492         :WLPENVNPNLFDRSPFEVQ::D:::H:Q:AEST::EKI:::::::::::LF:D:QP:::
rrnAC1113       :::::::::::::::::::::V::IDS:E:::E:::::::::::::D:::::::S:TAAE
HVO_2087        :::::::::::::::::::::::::::::::H:::::::T:I:R::E:I:V:G:G:::::

consensus       -------AGALDAARHRDRAARVAARGTVLLDNDG-VLPLADDAD-VAVIGPNADEAKIG
#oth            111111111221222..121221.1..1.1.2..111...1121.11.....1211212.
Hut0492         :::::::E::V:::E::::SR:::E::A:V:Q::DE::::SPEI:SI::::::::T::::
rrnAC1113       DGASDDQ::E::SQ::::I::D::::::::::::::::::::G::::::::::I::P:L:
HVO_2087        ::::::::SPPEDDG::EL:ETI::::::::E::::T:::::::::::::::GVE:IST:

consensus       GGGSSEMTPLHEVPPAAGIRARADGA--VTFARGVPRIE-----SVSIFDLLLFAGEDDA
#oth            ..1..121121212121.122.12.211.1211.112..1111111.2111222211112
Hut0492         :::::AV::SST:S:L::V:E:V::DTR:A::::TE:::DHHDA:E::V::S:S:S:TP:
rrnAC1113       ::::::T::V:S:T:V:::ES::E::::::T:F:::Q::::::::::L::::P:V::::D
HVO_2087        ::-::::DA:::A:T:T::D:::T:S::::VE::::P:::::::K::F:------:G::E

consensus       GDDQ---IARDDPELDDAVDAAAAADVAVVVVRDAATEARDRDSLALPGQQDRLVAAVAA
#oth            2.2211122221.21....2..121.....1.2.111.12..11.2...2..2..21..1
Hut0492         V:TV:::LGN:T::R::::I::RQ::::::::Q:D:::GE::-::W:::E:::::::::D
rrnAC1113       T:GTAAD::QQ::S::::::::::::::::F::::T::::::::::::::::D::S::::
HVO_2087        :::::::--:P::T:::::S:::DT:::::::E:::A::V:::D:T:::G::E::ED:::

consensus       ANDNTVVVVRSAGPVELPWREDVAAVLEQWYPGQADGDAAAAVLFGDADPSGRLPVTFAR
#oth            2111....1212..111..11..2111.2.....1..1.2..1.1..2..1.......12
Hut0492         :A:R::::CNT:::IRM::A:::DGIV:M:::::E::H:T::I::::S::G:::::::G:
rrnAC1113       T:E::::::::G::::::::::::::::::::::::::::::::Y::R:::::::::::P
HVO_2087        V::::::::Q:S::::::::D::S::::S::::::::::L:::::::::::::::::::N

consensus       E-DDYPAA-AEARYPGVDDEVQYDENVFVGYRHFDDEDADPQYPFGHGLSYAAFEYRDAE
#oth            1121..21121211..112.12...2111...1..11211.211..1.1..12.1.2111
Hut0492         RL:::::::T:E:::::GL:AE:::G:::::::::::GIE::FA:::::::TD:T:S:VT
rrnAC1113       ::GE::T:G::R:::::::::H:::D::I::::::::::::T::::::H:::T:::G:::
HVO_2087        ::E:::VT:DD:TF::I:G:::::::LL::::Y::ATE:::V::::Y::::::::::G::

consensus       IEAER--------------RVEVTVENVADRPGREVVQAYVRPANADDVDRPRAELAGFE
#oth            22212111111111111112.1.1.1.12..1..1.1.1.11.22222211.221.1...
Hut0492         V::DGEEGATIEGGDEPGVS::::::::G:::::D:::V:LG::EXXXXXX:K:-:::::
rrnAC1113       :TG:W::::::::::::::T:A:P:K:A::::::::I::::::PSV:G:::::R::::::
HVO_2087        LVD:::::::::::::::::::::::::S::A:::::::::::S::S:-:::VS::G:::

consensus       AVQLDAGETKTVALDIDDLAFARYDENAG-WTADEGEYTVEIGRSARDI--EETIAIDR-
#oth            11211.1.12..2121.11..22..221.1.1121.21.111...11.111121222221
Hut0492         PIT::::::T::T:S::AR:::Y::VE::E:V:T::::::LV::::Q::VD::::::EES
rrnAC1113       ::::::D:Q:::::TL:::::S:::P:S::::V:T:T::::::::S:::::RT:VPV:::
HVO_2087        ::SIP::::V::DV:::::::TE:::T::::::L::PF:I::::::::V:::FELTL--:

consensus       ----
#oth            1111
Hut0492         TIVE
rrnAC1113       ::::
HVO_2087        ::::