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3 genomes BUD2470 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC0991

HVO_A0160

- -

Hut2475

- - -

Pairwise sequence scores
Consensus score5087 Hut2475 HVO_A0160 rrnAC0991
2852Hut2475 5019 1362 1328
3085HVO_A0160 1362 5325 1628
2782rrnAC0991 1328 1628 4835

730 symbols
consensus       ----TMFCIAPY-LGAAFLAAVISASMALLGTRYRDEPSGRALIALCLAAGCWAIAEALL
#oth            111122222211111121.111212122222211.2212222222222211212221121
Hut2475         MAWQ:SWM:V:L::I::::LL:LGL::L::V::E:MT:TIG::LVF:::GAT::::::Y-
HVO_A0160       ::::VT:SLS:::V::L::::::::GV:SY:W:::::::::WF:::TVS::::SLF::F:
rrnAC0991       ::::-:V:V:V:S::NGI:::ST:M:T------::--------------::LLVKYLG::

consensus       QLANTQFSRRIWFALEPGPAESSVFATLLFALAASGRERWLSRRRAALLLAGPAVAAGGV
#oth            21121212222..112222222211221211122111.11111112.1111212122121
Hut2475         :V:::GA:K:::::IGS:SFVVV:::W:V::::::E::::::LP:I:PV:::GG:L::LF
HVO_A0160       L::DSP:T:LL::::::I:::::::F::::::EIT:Y:::V:::T::::AVW::F:IA::
rrnAC0991       G:GP:::----::G:T-----------------Y::::SV:T:::W:::::P:V:IL:F:

consensus       ATNA--IHALLWESDGFVQRAGLAALEVQNGPIFWGALLYQYSAIGAAIVVLAVHGLRRR
#oth            2.12112.211.112211222112221122111112221121221.22211121211112
Hut2475         F::P::::GA::::-TI:S::::FV:D::FTA:YG::M:GLLTVT:LG:A::W:Y:TQ:D
HVO_A0160       ::::LGV:::::::LS:ATVG:IT:T::VP::L::VDVV:S:V:::::L:::G::C::S:
rrnAC0991       V:AQ::S:D:M:TL:::::GPP::NP:RE::::::LN::::::L::TTY:IV:LF::::S

consensus       GRYRRQAGLMLAGIIIPAGAGAVYHLGLGPGGNANPIAIAFTATGIILAVALFRRRLLDR
#oth            1211211221221122.222121122121.2221211.2211112222112111221112
Hut2475         :VSL:AI:W:V:::SF:V:T:LL::V:::::V:LT:::LGG::STL:YL:--:T:E:IG:
HVO_A0160       QI::K::LVLFVA:LV::VV::::L:--I:FSP::::::S:A::SSL:::G:S:Y:I::I
rrnAC0991       ::::T::T:::L:G:::LI:SV:FVF:S::M:S:DQT:F:::F:::VF:I::::FD:::L

consensus       MPIARDAVIERMADPVLVVDADGRLADLNPAAAALLDNEETALGRPVTDVIPEWPDGVDA
#oth            2.21.221211.11112..1211112.2.11121.1.21211..1211112122122112
Hut2475         V:LP:S::LN::DEGLV::G:::HVS::::::KS:::L:::::::T:::::::::::::-
HVO_A0160       S:::::L:::::::::::::RK:::::S::::R::F:VSHPP::S::A:AFD--:ET:E:
rrnAC0991       ::V::HTLV:E:::::F:::K:E::V:V:ETG:::::::G:::::SA:E:M:SYDSLP:G

consensus       DDSADADVVVEDNGDARHFRIRRSALTDQRDSVIGELHIIRDRTERRAAERRFRALIERS
#oth            1112221111111122.112122.211.222111.212122.2..112212111111.21
Hut2475         ::RTTV::T:::-::R::L:::V:P:S:SHH:Q::---L:S::::QE:LQQ:Y::I::E:
HVO_A0160       LE:GGELR::D:::E::::EVD:::V::G::A:R:H:::LH:I::::VR::W::::T:NA
rrnAC0991       :::::::::I:S:SGP:Y:D:NC:T::::TG::::::L:Y::V::::I::E::QR:::::

consensus       SDANFILDENGEITYASDSVERILGADETELEGENAREFIHPDDRRAAAEDFARALARPG
#oth            112222..12.221.2.2111211.222112111222112111.1222212122212211
Hut2475         AE::VL:::::T:I:::P:::::F:WTS::M:::T:F::VAET::ERIRAE:E:V::N::
HVO_A0160       ::LI:V::AD:SV::L:::AAQT:::::DPS:VRSL:R:L::::ED::I:T:RE::E::D
rrnAC0991       ::MVT::::V::F::V:QP::K:::YEP:::V:::VI:Y:::::::DV:::L:KYVDDY:

consensus       YDATAELRFRDAAGGWRVFEARARNLLDDPHVEGIVVNSRDVTERRQREQQLERQNERLD
#oth            1221212.1112211111112121...11.2.11111111...11121112..1211112
Hut2475         :EPRL:Y:VV:RE:HEC:::SLV:::::H::::A:A:T::::::::E:::E:::M::::E
HVO_A0160       E:::::::::SSTR:::::GV:C:::::::V:G:V:::AQ:::D::KH:::::-------
rrnAC0991       :SG:YVV::::::::::FI::::T:::A::F:::::L:::::::QL::KRK:::::::::

consensus       QFASIVSHDLRNPLNVAEGRLELA-RDADRGDDDAIEAIQAAHERMDAIIDDILTLAREG
#oth            2..1.11.......1..11212.212221121212212112111.1221.1.21111.21
Hut2475         E::::L::::::::E:::IHTT:::---Q:::E::L:TV:Q::D:I::M::::::YV::D
HVO_A0160       T::N:::::::::::::::Y:::V:KE:::P:P:HV:R:E::::::GE::A:V:A:::G:
rrnAC0991       ::::::A::::::::::S:::S:LE::V:ASH:AS:N:::EQL:::ES::::SP::::S:

consensus       DTVDEHDEVALEAVAADAWQNVETGGATL--DIKAEAQIDADRRRLRRLFENLFRNSVEH
#oth            2..11211121121122..22.1.11...111222222211..2..2211......11..
Hut2475         ::::P-::I:F:P:VQS::ET:H:R::::SF:MP::TV:E::::::Q:AL:::::::I::
HVO_A0160       -:::::ET:S:D::::E::T:::::A:::::::VES:SF::::T::LQ::::::::A:::
rrnAC0991       E::T:T:::D::MI:Y::::S::::::::::VV:TTL:L:G::N:::N::::::::::::

consensus       GE-----------------------------GDAVTVRVGAARDG--FFVEDDGPGIPPA
#oth            12111111111111111111111111111111221..21.2221.11.1.1.1.1.1.12
Hut2475         :-::::::::::::::::::::::::::::::E:::::I:R:DA::::::A::::::::E
HVO_A0160       :SMGSRDSPDDAVEHGSTGNQTASGDAVEHV::G:::T:::T::::::::::::::V:::
rrnAC0991       N::::::::::::::::::::::::::::::STDL::E::SLP::VG:Y:::T:T:::NQ

consensus       DRAAVFENGFTTADEGTGFGLAIVRRIAQAHGWEVGATEAESGGARFVI----RAGESAN
#oth            1.221.12.1..121...1.....12111....2122112111....1211112221122
Hut2475         :::S::D::::::E::::L:::::::T::::::T:T:::S:::::::--::::---:FG:
HVO_A0160       ::PKL::S::::::D::::::::::T::D::::S::YEDVADA::::::RGVE:::D::Q
rrnAC0991       E:D::::Q:Y::NT::::::::::KD:V::::::ISV:::::::::::V::::ECH::PM

consensus       VSQPAED---
#oth            112.222111
Hut2475         ::F:S:::::
HVO_A0160       E:G::SSDDA
rrnAC0991       :N::GTT:::