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3 genomes BUD2481 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC2762

-

Hbo1345

-

Hut2883

- - -

Pairwise sequence scores
Consensus score10311 Hbo1345 Hut2883 rrnAC2762
8336Hbo1345 13689 6884 6267
8518Hut2883 6884 10636 6429
7514rrnAC2762 6267 6429 8926

1879 symbols
consensus       MARA---ENTELIDRFEEFYRNYYRNEIGELAQKYPNDQKSLYIDYDDLYRFDPDLAEDY
#oth            ..2.11111111111.11...2..111..1...1...1.1..11.11..1...1...1..
Hbo1345         ::Q:PQDPDVD:TE::IQ:::K::SDD::R:::R:::E:R:::::::::F:::E::::::
Hut2883         :::::::::::F::L::::::D::::::::::::::::::::FV::Q:::::::::::::
rrnAC2762       ::T::::::::::::::::::::::::::::::::::::::::::W:::::::::::D::

consensus       RNKPDQIQEYAEEALRLYDLPVDVKLGQAHVRLRNLPESEDIRDIR--ADHRGRLVSVQG
#oth            .2..1.11.........1...1..1..1....21...1.2...11.1121.2.21.111.
Hbo1345         :K:::::R:::::::::::::::::::R:::::::::D:V:::N::VHD::I::M:::::
Hut2883         ::::::L::::::::::F:::I::::::::::MT:::::T:::::::::::::Q:::I::
rrnAC2762       :T::E:::::::::::::::::::S:::::::V:::::::::::L:::HE:H:N::A:R:

consensus       IIRKATDVRPKITEAAFECQRCGTLTRIPQTAGDFQEPHECQGCERQGPFRINFDQSEFI
#oth            .1....1....111..........1.1...1211.....1..........1211...1.1
Hbo1345         :V::::::::::::::::::::::M:Y::::DSG::::::::::::::::HVD::::::V
Hut2883         ::::::E::::::D::::::::::::::::ST::::::::::::::::::::::::::::
rrnAC2762       :::::::::::VI::::::::::::::::::::::::::D:::::::::::L:T:::Q::

consensus       DAQKLRVQESPEGLRGGETPQSIDINIEDDITGHVTAGDHVRVTGVLKLDQRGNDREKSP
#oth            .1...................1..11....1..1.......1...1.111.11112..11
Hbo1345         :S:::::::::::::::::::::::D::::V::E:::::::T:::::HIE:QTSGQ::T:
Hut2883         :::::::::::::::::::::N::V::::::::::::::::::::::::::::::::::A
rrnAC2762       :::::::::::::::::::::::::::::::::::::::::::::I:::::::::N::::

consensus       MFDIYMNGVSVEIEDEEFEDMDIDEADKAEIVELSNEPDIYDKMIGSIAPSIYGYEQEKL
#oth            1..2..2...1.....1..1.1.212.12...1..211...21.2111.......11...
Hbo1345         I::L::D:::I::::::::::::S:E:V::::::::D::::Q:::::V::::::::::::
Hut2883         :::V:::::::::::::::E:::::D::K:::A::E:S:::EQ:TD:::::::::D::::
rrnAC2762       ::::::E:::::::::Q::::E:TD:::T::::::S::::::::V:A:::::::::K:::

consensus       AMALQLFSGVTKHLPDGSRIRGDLHMLLIGDPGTGKCVAGDTRVTLADGHERPIRELVEA
#oth            .12.........1...1........1...........121..1.11...2121.111..2
Hbo1345         ::I::::::::::::::::::::::::::::::::::::::::::V:::S:V:::K:::Q
Hut2883         :I::::::::::::::E::::::::V:::::::::::LDA::N:Q::::TTSA:G:::::
rrnAC2762       ::M:::::::::E:::::::::::::::::::::::::H:::::::::::::::::V::S

consensus       NLDDPKPVDDGVWDAVDFDVPSLAHDGSITTARATKVWKREAPERLYRIRTAAGRELDVT
#oth            ...1..........211121.1112..121.22.......1..121.1...12.2..1..
Hbo1345         :::E::::::::::::::E:::M::::::::R:::::::::::D:M:E::::::H::T::
Hut2883         ::::::::::::::HASIPL:T::P:::L:::E:::::::::::H::::::ES:K:::::
rrnAC2762       ::::::::::::::T::::::::QS::TVA:QN:::::::K:::T:::::::T:::::::

consensus       PSHPLFVQCDGRFQAREAENLEAGQFVAVPRSVPTAGDNRLDVDHRRSQSNNAVRLDLPD
#oth            .......12..222.22.11..2.21..1..111.2111211122.2..12.111111.1
Hbo1345         :::::::G:::GTE:VV:D:::::::::::::L::D:::S:::SI:::::::::::::::
Hut2883         ::::::::Q::TPT:M::::::E:E:::T:::::::::D:IEA:::E:::P::::FSA::
rrnAC2762       ::::::::S:::::::K::E::S:TH:::::K:S:NAC:E:::TF:Q::AH:RID::::P

consensus       RWTPSLARLIGYIVAEGYVERRADNTADVSITNNDREVLDDAAAALEALNLRATERSRHE
#oth            21..1....2..11...1.12.21111211...2.111.1.1221112.2.221.11211
Hbo1345         :L:::::::L::VA::::::::DSGS:F:::::S:::I:::V:D::DE:G:::::::T:D
Hut2883         T::::::::V:::::::H:VH:::::::LR:::E:EP::E::R::F:::D:PYS:DV:E:
rrnAC2762       Q:::E:::::::::::::::Q:P:::GY::::::::::::::KSV::T:::NV::::S::

consensus       DKTTRELRCSSSEFVSFLEAIEPALLDNSAEQRVPARILRASDNVRRGFLRAYVEGEGHV
#oth            2111.1.2.111.1..1.1211111.22.111...22.21.1121211.1.11111..1.
Hbo1345         :::::::I:::::L::L::K:::::::G:S::::::P::::KSP:K::::::F:DA::T:
Hut2883         SGV::-:::H::::::::::::::I:E:::Y::::E::KQ:::SI::A::::::::::::
rrnAC2762       G::A:::L::AG::::::ASLDET::QS:::R:::QD:M::::::VT::I:G:I::::::

consensus       SASQREITVASMSRALLEDVRCLLLTQGIDAQLRERANGSYRLRISGDDFARYAAQIGFV
#oth            12.1..2..1.1.221..1..2..212..211122121..1...1..11.22.2211.11
Hbo1345         :P::::V::S:T::DV::G::S:::AF::SS:::TK:D::F:::V::::::::T::::L:
Hut2883         A::E::L::::::E::::::::::T:L::::SIH::V:::::::::::::GH:VSAV:::
rrnAC2762       :T:::::::::::KP::::::T::V::::T:::QP:N::::::::::QS:HD::E::::I

consensus       TARKRRAAEAFEGTAGNTNRDVVPNLGDTLRRIREALGLTQDDCGLPRSTYQHYERGDRN
#oth            .2..22.11221112....1.11.22.11.122..1.1.1.21..1..1........1..
Hbo1345         :E::::::::VVDVD:::::::I:GV::::CDL::S:::E::::::::::::::::::::
Hut2883         :D::QL:::SY:::::::::::::VS:::::EV::::A:::T:::V::T:::::::::::
rrnAC2762       ::::TE:CRQ::::H::::L:I:::::PE::::::::::::SE::::::::::::::R::

consensus       PSRDSLRAVVDAFEERLA------------------ELRNDLPISDQAAADG--------
#oth            ...1..22.111.1211.11111111111111111112222221112221..11111111
Hbo1345         ::::::QT::QT:S:AA:::::::::::::::::::---------:GL::::::::::::
Hut2883         :::G::::::::::K:::WLKDQREGLAAEDWETIV:::DE:S::Q:SL:::MDVTQTAI
rrnAC2762       ::::::ES:L::::T::::::::::::::::::::::MN::T::::T:RS::::::::::

consensus       ----------DGGAG---------------SVERDLARLAALADGDIAWDRIESIEPVEP
#oth            11111111111..2211111111111111111122122.21.121.11....1..111.1
Hbo1345         ::::::::::::::-:::::::::::::::::::C::S:R:::::::::::::::D::::
Hut2883         SYYERNEVAP:::ETVAASSVINDRLEEALA::STVD::DD::TN:VR::::A:::A:::
rrnAC2762       ::::::::::-::T:::::::::::::::::LRQ::NG::::VE:::::::::::::I:H

consensus       DDEWVYDLEIEGTHNYLTNGVVSHNSQMLQYIRNIAPRSVYTSGKGSSSAGLTAAAVRDD
#oth            .11......1....1111.1.......1.1..11......1...................
Hbo1345         :::::::::::::::F:::N::::::::::::::::::::::::::::::::::::::::
Hut2883         :::::::::V::::S:VS:::::::::I:::::H::::::F:::::::::::::::::::
rrnAC2762       :EK::::::::::::::::::::::::::S::E:::::::::::::::::::::::::::

consensus       FGDGQQWTLEAGALVLADRGIAAVDELDKMRCVTGDSLVQAAD--GRRRIRDIAGDAARA
#oth            ..................2....1......111111211222111122111221222122
Hbo1345         ::::::::::::::::::K::::::::::::::::::::HL::DG:IK::::::H::::E
Hut2883         ::::::::::::::::::::::::::::::::::::T::::G:::::::::EL::ET:E:
rrnAC2762       ::::::::::::::::::Q::::I::::::-------------::---------------

consensus       GSIEELANGRTIRNFDADVWSMTDDEKLTRRPVTAIHEYDAPDELTRVTLQSGERLTAIH
#oth            112111211111122122112111122122111111111111221221112211221222
Hbo1345         ::T::::::::::::::E:::::::G::VS::::::::::::::::::::::::::::::
Hut2883         ::::::P::::::DV:I:::T:::::T:::::::::::::::ET:YE:::ST::EV:VTP
rrnAC2762       ------------------------------------------------------------

consensus       DHPFIIEDAGERVEKPAANLQPGDLVFVPRRLA-RATDGGIAQADS--------------
#oth            111122222222112112222111211112221121111122221211111111111111
Hbo1345         :::::TF:D::S:::::::VS:::W::::::::D::::::VRT:::IAGGTVTATENELS
Hut2883         ::::F::Q:SG:::T::ED::::::::::EGS::M::::::::I:T::::::::::::::
rrnAC2762       ---------------------------------:------------::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo1345         PAFGAVLGYLSGDGNVYYDREEGVYGIRFTNKEEELLADFERACRDACDAEAIRPPSEQR
Hut2883         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo1345         DDGVETVRLSGKEFADVVLDAGMNLEVYDGKAFPTAISAASRATKAAFVRAMADSEGSVD
Hut2883         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo1345         TDSGNVKISSSSYELVLGIKSLLLEFDITTQIQHRERSGKRDLYVLAVTAAESLQRFNRH
Hut2883         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ----------------------------------------ESDRLGPAECGL--------
#oth            111111111111111111111111111111111111111121211222121111111111
Hbo1345         IGFTLDRKQSALDEVCESVSGDRTILDVIPHCGELLSSLR::L::YVS::::VDATDCNF
Hut2883         ::::::::::::::::::::::::::::::::::::::::S::::::::S::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::------------::::::::

consensus       ------------------------------------------------------------
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo1345         ENKDANVSISCARTILDAFESRTQEAESDAEQLTEPCDWEILSDIKERYHVSQSELATGT
Hut2883         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       ---------------------------------------------GDIGLRRIENVESVD
#oth            111111111111111111111111111111111111111111111112221222211212
Hbo1345         PYSQQQISLLWGADDELRAVTRNRLREIVESVVNTDIEPFRHLVR::VKW::VKS::T::
Hut2883         :::::::::::::::::::::::::::::::::::::::::::::::::::T:::::::P
rrnAC2762       :::::::::::::::::::::::::::::::::::::::::::::---------------

consensus       DHDYDD------------------------------------------------------
#oth            221212111111111111111111111111111111111111111111111111111111
Hbo1345         ES:V::QIRLLKHELADLLGVKTESAVEYGRSLLDSEPNAEDWDELRVELNRHNVSFADI
Hut2883         :::::S::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ------::::::::::::::::::::::::::::::::::::::::::::::::::::::

consensus       --------------------------------------------------------VYDL
#oth            111111111111111111111111111111111111111111111111111111111111
Hbo1345         ARDLGVADSTVSRWFNGVVETDRFVDVANAARDRFAEIRADVRRYLDTIESRSTPK::::
Hut2883         ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
rrnAC2762       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::----

consensus       TVEGTHNFLANGMVVHNSEDRSAMHEALEQQRISVSKAGINATLKSRCSLLGAANPKYGR
#oth            111111112111111111........1....2..1.........................
Hbo1345         ::::::::V:::::::::::::::::G::::Q::::::::::::::::::::::::::::
Hut2883         :::::::::::::::::::::::::::::::S::I:::::::::::::::::::::::::
rrnAC2762       ----------------SP::::::::::::::::::::::::::::::::::::::::::

consensus       FDQYEPIGEQIDLEPALISRFDLIFTVTDDPDEEEDANLAEHIIRTNYAGELHTHREQNA
#oth            .....1.......................2..1.2.12.....12.......1.1.2212
Hbo1345         :::::S::::::::::::::::::::::::::P:S::E::::::N:::::::::Q:SKI:
Hut2883         :::::::::::::::::::::::::::::Q:::::::K:::::L::::::::N::::::S
rrnAC2762       :::::::::::::::::::::::::::::K::::K:R:::::::Q:::::::::::TE:P

consensus       TSNFSEEEVANVTEEVAPEIDPELLRKYVAYAKRNCFPTMTEEAKAAIRDFYVNLRAKGA
#oth            1.21111..22..11...1.111.....1.....1.1....1...22.1....21.2..2
Hbo1345         N:E:T:A::NS::::::::::A::::::I:::::::Y::::D:::EV:::::::F:::::
Hut2883         ::DY:A:::::::DT:::::::::::::::::::S::::::::::::::::::E::T::S
rrnAC2762       :::::::::GT:::::::T:E:D::::::::::::::::::::::SR:E::::D::L::Q

consensus       DEDAPVPVTARKLEALVRLAEASARVRLSDTVDEADADRVINIVRSCLRDIGIDPETGEF
#oth            1..1.....................1......2.2..2.122.1211.21..2......1
Hbo1345         :::S::::::::::::::::::::::::::::T:D::V::T:::E:::::::M:::::::
Hut2883         G:::::::::::::::::::::::::::::::E:E::E:::G::::S:E::::::::::L
rrnAC2762       :::::::::::::::::::::::::I:::::::::::::AVD:AHY::KE::V:::::::

consensus       DADVVETGTSKNQRDRIKNIKGIISDIEDEYDEGAPVDVVIERA-EEVGIDESKAEHEIE
#oth            ...1....1..2.....1.1111.1...1..1....1.1..1..11.11211....1..1
Hbo1345         :::I:::::::::::::::L:QL::::::::E::::::E::S::TT:LNL::::::Q:::
Hut2883         :::::::::::S::::::::R:::A:::E::::::::::::::::::::MEA::::::::
rrnAC2762       ::::::::Q::T:::::Q::::::::::::::::::A::::::::::::::::::::::D

consensus       KLKQKGEVYEPRTDHLRTT
#oth            1.111..............
Hbo1345         N:RR:::::::::::::::
Hut2883         ::::Q::::::::::::::
rrnAC2762       :::::::::::::::::::