3 genomes BUD2482 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnB0083 - Hbo2246 - Hut0267 - - -

Pairwise sequence scores
Consensus score	1785	Hut0267	rrnB0083	Hbo2246
979	Hut0267	1810	544	638
1112	rrnB0083	544	1831	681
1150	Hbo2246	638	681	1828

256 symbols
consensus       -------GASVASRLSLRSAVGAPLRRQTYRNLLYLGLAFPLGIAYFVILVIGFSIGVGL
#oth            11111112221212212.12121.1121..11....1....1.11.112212.1121.2.
Hut0267         :::::::---:N::SRF:GFL:::F:::::::::::::::::::::L:VV:V:LAL::::
rrnB0083        :::::::MLVP::LP::::I:VT::QPR::LH:::::::::F:::::::::T::::A:P:
Hbo2246         MLSDALS::::GPT::V::::T::::L:::::::::S::::::LL::LFFS::::V::S:

consensus       TIVVIGIPILAMLLAAARGLAAVERLLATLLLGHDIAAPT-TLRDGSLRERLRALVVNRR
#oth            12111...11222122221.121..2..11...22222111122111221112211122.
Hut0267         S:::V::::::T:VVVGTL::GW::W:::R::::EFETRS:::EGD:S::K:VSA:TDL:
rrnB0083        :VLI::::LFI:T:LIV:::G:::::::N::::T::::::YPF::::VLG:::::I::::
Hbo2246         :F::::::::LFV::::L:::S:::K:::::::VSVRS::::SS::P:V::VKQ:::SQ:

consensus       TWAACGYLAAKFILGIGAFVAIMTGLTTAISFLAAPLFYDEPGVYVGIITARPVEIRPAI
#oth            .12222..22.122.2221122212..12111122.22111..11..12122.1222.22
Hut0267         :YTPLV::P:::VF:VLTV:VVF:T:::G::LVF:::YFG:::::::V::D:::::H:::
rrnB0083        :::E::::LL::PV::::::FLV::::MS:T:::T:V::::::LR:::FP:D::TLV:SL
Hbo2246         ::K:VF:::S:L:::LIS:T:::SL::::V:::MI:FV::Q:::::::V:SE:AVF::QM

consensus       LIGWDNLLVGAETVLRLDEWAVDTLADALAVSAIGVGLGLLTLNIVNGLAWLSGRYTRAL
#oth            221.121.1.211122122.2121.22..21121.1212111..11.11.1.1121.22.
Hut0267         YV::NK::I:F::::S::Y:RIQ::PG::F::M::::IT::G::V:::::R:A:WL:QR:
rrnB0083        S:P:::V:::::F:VTVS:::::S:::::LF::::AV:F::::::::LV::::R::::::
Hbo2246         :L:::G::::VR:AF::TS:Q:T::SE::::AGL::I::IV::::L::::::::Q::VL:

consensus       LDDDAADADPLAAAA-
#oth            .112212222122121
Hut0267         :::GYSLVET:T::KN
rrnB0083        :G:P::VL:W:SSL-:
Hbo2246         ::E:D:::S:E:N:::