3 genomes BUD2483 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3494 - Hbo2336 - Hut2233 - - -

Pairwise sequence scores
Consensus score	706	Hut2233	rrnAC3494	Hbo2336
534	Hut2233	864	465	454
620	rrnAC3494	465	705	536
575	Hbo2336	454	536	917

140 symbols
consensus       --------------------------MEKALWYLLAGTRGGANRARIIDALADRPMNANR
#oth            11111111111111111111111111........121....1..1..121.21..1...2
Hut2233         :::::::::::::::::::::::::::::::::::S::::::::::::SL:DE::R::::
rrnAC3494       :::::::::::::::::::::::::::::::::::TA::::::::::::::::::::::E
Hbo2336         MSCGQLWIPFQTPQTVSLTNDGRTQS::::::::F::::::E::V::VH::S:::::::Q

consensus       LADELDVGYRTIRHHIEQLEDHDVVEAGDEDYGKLYFLTDRFEAYRDTFERIIEQADE--
#oth            ..21.1.1.2.1...212.11.....2.111.11....1...121..1..2.2122.211
Hut2233         ::EA:::D:N:V:::LDM:V::::::::G::::E::::S:::::N::A:::::N:::LAV
rrnAC3494       :::::::::K:::::M::::::::::S:::E:A:::::::::DN::::::E:V:KM::::
Hbo2336         ::T::N:::::::::::L::E:::::G::N:::::::::::::T::::::Q:T:HV:-::

consensus       --------------------
#oth            11111111111111111111
Hut2233         AGAKSSRDGDPTDTETETPN
rrnAC3494       ::::::::::::::::::::
Hbo2336         ::::::::::::::::::::