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3 genomes BUD2489 3 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC1046

-

Hbo0631

-

Hut1877

- - -

Pairwise sequence scores
Consensus score1935 Hbo0631 Hut1877 rrnAC1046
806Hbo0631 1823 395 370
1207Hut1877 395 1917 746
1212rrnAC1046 370 746 1947

269 symbols
consensus       --MARAVGAACLAALIALAGCGAA-LGDSRPPSDDRAERAVNETADALANVDAYRFEMSM
#oth            1112.212122121222.1.1.12112.12.1..21.2221111211221.21.212111
Hbo0631         VLS::QF:LLVVI:V:::I:A:::G:F:T:::::PA:::L::Q::::TT::S::S:TI:G
Hut1877         :::H:::P::L::::LV:::::M-:::::Q:::::::LEIR:::I:::E:::S:--G:::
rrnAC1046       :::R:L:L:V::VSF--::::::F:MT::P:L::E::VT::E:ANSTV:A:E::::::E:

consensus       DVSASAGGRSRTARADGDGAANRSARRMRMNIRLQDRTVTSYIRGYRAYQQCQDPWSGY-
#oth            212.121121112221.1112.11112111222212211111221121.22.22.11111
Hbo0631         SAV:KQ::ER:::TY::HA:F:::E:TY::S:S:DGESK:LFV:::SL:KP:--:Y:E:V
Hut1877         ::::::E:::ESIS:T:::I:::T::L::::MTV:S::::::LQNRT::T::PS::::W:
rrnAC1046       H:T::D:EQ:::V:V:::::V:V::K::QATT:T::Q::E:::D::::::G:::::G:::

consensus       AVENAS------RNREWATLTPLGRQRQLFERSNVYWRGTATVDGNRTAVVEAHPDQETL
#oth            211.2.1111112222.2.2.1.11.22..1111..12.12.11.221211212.21111
Hbo0631         N:::::YATELPE::S:T:Y:M::G:::::DV:R::DC::D::N:TEVR:::VV:::SK:
Hut1877         GEQ:Q:::::::TDI::L::::::::VE::::T::::D:::::::HD:::IV:::T::::
rrnAC1046       ::::V::::::::SEP:::T:::H::LL:::::::::::NE:L:::::VL:T:S:ST::I

consensus       SSLMARRQ-GDEANRRANAENATAALWLDRETRRPVRSELRIQISQRGAEATATIMIQYT
#oth            1.12222111122211212.12112.12111121.12.211211122.221111122111
Hbo0631         :::S:GVP::::DV::M:::--AS::NMT:SE:K:TP:---------:VGLSD::PS:T:
Hut1877         ::FPGES::T:L::PD::V::I::K::V::::S:::::L::L:::GN:G::::KV::D::
rrnAC1046       R:::D:::A:GMEL::GSL:::::R::::P::N:::Q::::::::::::T:::::TV::S

consensus       DYDDS--ATASIPAAIDDRPRELGCPGA-
#oth            2.1211121211.2222122221111121
Hbo0631         S::S:GCS:::N::L:IS:---------:
Hut1877         :::E:::I:VK::EIS::EV:T:::::G:
rrnAC1046       E:G:P:::AI:::P:VY:D:H:::::::S