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3 genomes BUD2505 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3524

- -

Hmu0416

Hmu0992

Hut1250

Hut1647

- - -

Pairwise sequence scores
Consensus score4643 Hmu0416 Hut1647 Hut1250 rrnAC3524 Hmu0992
2537Hmu0416 4927 1851 1475 1323 1186
2590Hut1647 1851 5097 1472 1393 1340
2568Hut1250 1475 1472 5071 1440 1469
2578rrnAC3524 1323 1393 1440 4696 1890
2586Hmu0992 1186 1340 1469 1890 4564

726 symbols
consensus       MTADEAAGRL-QR--AWSR---RGSAY-RRA-RFLFGDRVGLTVFLGVVVLFALLWRVGF
#oth            1243242311322334234113.234232223321...13..311.231213212..111
Hmu0416         :NG:RSS:VDA:FRSV::D::::L:R:AD::GQ:V:::AI:::LW::::L:G::S:::::
Hut1647         V:RVG::EVD:--::E:LS::E:::MIR:Q:VAV:::::::::L::::::VL:A::::::
Hut1250         ::S:GTSL::FD:NQP:G:RYR:LAHAG::LE:GV::::W::F:::LAL:VSG:I::::I
rrnAC3524       :::A:FV:::R::TP:L:N::T:ET:::---:SV:::::L::S:::AT::::G::::TA:
Hmu0992         :IDR:R:T:::--::----:::::LS::---:::::::::::L::::SLC::LA:::TA:

consensus       FITDSYTIANALAALADGRLAMTRIA--YGLSLGT-PGLNEYGGQLYARNYGQIVLSLPF
#oth            1.1.1.221.2222122.3123222311.132.311..32321.3412..1.13111..3
Hmu0416         ::::T:P::::V:N:::::::::PPDFQ:S:T:::Q:::H::::RF:::::::V:AA:::
Hut1647         ::::T:A:::T:VN::::::HIA::E:::S:T::SQ:::Y:H:::VFG:::::AA:A:::
Hut1250         :::::::VG::FV::TE:H:DVR::V::::E::A::::MHVVN::::G::F::L:::::A
rrnAC3524       L:N::::L::G:YS:SN:Q::::EA:::::PG:E::::A:N:::KW::::::V::::::L
Hmu0992         L:N:::::::G:::V:::SV:L:EP:::::-::RS:::T:F:::ST:S::::V::::::V

consensus       LWLLEGLSALADLRIALAALWSLLVLGLGSQLGARFDRERLA-LAGTLVALGLFLANVAL
#oth            222.313332121122.111.1.313122332244321312422213331313.321.21
Hmu0416         ::::::A:VV:PP:LV::GG:A:G:V:::RR:A:::::RW:R::VAVA::SAW:A:A:V:
Hut1647         Y:::::TA:::E::LV::GG:::::AAFA::::QVL::P:VT::::::G:::::VG::::
Hut1250         Y:::S:::M:V:P::L:::::::S::::::V::SLVQ:::MFTV::S:L:T:S::::::I
rrnAC3524       VFV:DL:TTIVE:::::V:::::AL:A:VV:CSYYT:GDW:L:YG::VTV::::GL::T:
Hmu0992         :YA:G:IE:V:::PV::V:::::::Y:TVLLA:RQ:G:::::R:G:GC:VAAV::L::::

consensus       ATPLDPVQLHLLALQLLHLAAAGFVAVVLYRLLSRLQTRRVGVAAGVAAALGTPLAFWAT
#oth            222213333213....2324111212.331..2334232.2112222222211.221..2
Hmu0416         ::A::RS::P:V::::ST:::::V:::SC:::VGAFHD:::A::::::L::A::VG::::
Hut1647         S:::::RWNG:::::::S:V:::V:::AV:::::EYHGQ:::::G:LL:::AL:I:::::
Hut1250         ::DF:T:Y:PFA::::TGII:G:L:G::::::CR::::A:::::::ILGV::::VLL::P
rrnAC3524       :Q:::AG:T::Y::::T::LI:A:TP:::::::::V::::L:LLST:VLTA::::::::S
Hmu0992         VE:IS::PR:::::::::AT::A::G:LAF:::AFTDS::R:LV:A:::VG:::::::::

consensus       IPKRHVVTAALVLAVVFGLARSRA---ADGRAAAR---ARALAYAAVGLLAWIHAAEALL
#oth            2....1322223332123122..41113233433333331112.121123..2..2.112
Hmu0416         ::::::LVT:::FWS::AF::::Q:::L::::SYV::::HG:::G:L::V::V::F:GFF
Hut1647         M:::::MS:::IAI::::F::::N:::-----:::PLPS:::S:::::V:::L::::::V
Hut1250         ::::::F:TLFP::A:TT::L:::GGPSPK:SD::KRWTH::::GF::AT:::::::G::
rrnAC3524       V::::A::GTV:VC:AYC:Y:::K::P:::EVITQRQTF::::::L:::Y::V::P::::
Hmu0992         V:::::::::VA:::A:::VY::D:::::RDW:FE::::::VC::LLA:::::::P:::V

consensus       LFVALVLVDLLTAPR--NGPRTLAVIGGVFGLSLVPLAVTNALISGDPLTPPRLLPN-GG
#oth            13221332.32.22211223.2112212113.111.233..41.2.2.232..2122322
Hmu0416         :TA::FA::F::E::::KSR:R:::V::I:V::VL:M::::V::N:N::R:::::::V:P
Hut1647         VL:V::PF::A::R:::::I:E:G:L:V::A:::::FGL::Y::T:S:F:A::M:S:L::
Hut1250         ::LV:LFT::::GETAWRPG::T:A:LL:L::::::::A:::A:::::FE:::E:::YH:
rrnAC3524       :C:::A:::IP:::D:::S:::::R::V::::::L:FLI::IA:::S:VK::::ISR:--
Hmu0992         :::PF::::VP:::D::::::::G:L::::L:A::::F:::T::T:::::V::M:RT:--

consensus       -----------------------------GEPASDGGASSGDGDAGSGDAGGG------S
#oth            332221111111111111111111111113333333332233.2222.232221111222
Hmu0416         ES:::::::::::::::::::::::::::V:L:PTD::KA:::::A::T:::D::::ADA
Hut1647         LAELSPGGDIVVDGGGEPTQPTTPDPTPP:::::P:ET:PP::AS:P::P:T:LWSQIT:
Hut1250         QELVN::::::::::::::::::::::::AD:SA:A:G:::P:::SD::RPA::::::::
rrnAC3524       ::::::::::::::::::::::::::::::GSLG:ST:::AS:GS:::GS::S::::::-
Hmu0992         :::::::::::::::::::::::::::::---V:Q:SDI:LT::LS::::S::::::::-

consensus       --GGGDELPRSLL----GLL-PLFGA-V---LESAAAPLERLGGELAAGIR---TAQGDP
#oth            332144223322333331222213113232131224331441232332124111313222
Hmu0416         DPT::::TQ:T::DELF:::S:::ALSTL::A:TVL:Q:VFI:NYAV:AVSDGVA:A:EH
Hut1647         AL::VIG:GATGINGAI:V:DS:V::V:FG:I:A:::RIGE:W:YV:E::G:::I:F::L
Hut1250         TDD:PP:S:D::FPDVV::V:VGA::A:SAT:Q:VFDS:::::S::SE::M:::::VTE:
rrnAC3524       ::::SGG:LT::A::::---:::::::-::::::GMQ::SL::::::S:L:::::L:RQ:
Hmu0992         :::DTTT:::FV:::::---:VGI:L:-:::VQ::VE::TK:LALFR:::H:::SL:T::

consensus       ERLYHTFVRSGYIAGVAG-INGTETINLTVLESAPILGTLV-ALPVVAAVR-------NR
#oth            31223311.1.3332233233132323.111.13.3122211.21323432211111143
Hmu0416         :::WEI:::R:NS:SLS::::DY:::D:S:V::T::V:::L::::A::::H:::::::I:
Hut1647         :::G:V:L:::R:P::DYAT:DH::VE:::::A::M:::::::I:I:LGK:GLESGGGKL
Hut1250         V:V:Q::L::::L::::::ED::AA:S::::::M:L::G:L:::::A:TQ:FL:::::::
rrnAC3524       NDV::A:::::SAS:ALD::G:E:SV::SL:::::::VAM:G:::::RRL::::::::LP
Hmu0992         TDA:R:L::::::EH::ERAE::PEA:::L:::S:V:A:I:::AVSTSF:A:::::::TK

consensus       RSRATRSLSAPRRQADLFAATAAVALTLLYLPRLPLHAQLTVRYLLPVAPIAVYLAVRLP
#oth            224433313411432.32223222221.1.221...21.2.1...2.3412221343.1.
Hmu0416         :HGVAL:RLG::::T::LV:SY::V:::V:::::::FS:::::::::AIAL:S:CPF:::
Hut1647         :G:L:AIR:T::Y:T::::G:LVA:F::::::::::YS:I:::::V:IM:V:::GVM:::
Hut1250         T:SF:SW:RR:VGT::IGLGAY:I::::::::::::::::::::::::F::GL:FCL:S:
rrnAC3524       S:M:D:T:::G:-VV:V::I::F:GVI:::NT:::::::V:A:::F:LY:LG:::L::::
Hmu0992         ::IER:::PDGVTS::A:L:L:::::::V:IGS::::::V:::::F:::::L:C::::::

consensus       AVRRALAAHWRTFLWAYAGGVLIGGQLVVVALVALDPAIGEAFQFHALLALGVAGALAVW
#oth            21122143232233242322321.2223332222223231..3.1..122133.331133
Hmu0416         :::E:ISGAP::IAGV:::TI:V:PA:AA:V:GV::::L:::I:::::FG:C::AVA::L
Hut1647         ::::S:TTNV:E:ID::V:ATVV:IVG:IAVF::I:::::::M::::::N:IA::IA:AV
Hut1250         SI::PIE::APSLW:G:TV:LF::::VL:I:V:::TSTF:::V:L::VI:::L::::::T
rrnAC3524       :::KS::N::Y::::TV::T::::::VT:MFVALTVNG::::::L:::::V:I:VP:GI:
Hmu0992         P:G:::D:::::V::SWSA:::::::::L:::::::VGRA:::::::V:G:A::L::GS:

consensus       VVCSTVAER--ADRSGAVLLGLAGGAATAFLVLASIEY------FALGGAHALPMVRALA
#oth            3143334242242332.33313131221222312211.111111232.231121222212
Hmu0416         ::GR:::PDRVSP::V:IGMAV::::T:VY:S:::V::::::::::Y:-PF:FDV:GLI:
Hut1647         ::LD:IDGP::-:LPV:TAI:T::::::TLY:::G:::::::::ITY:-QF:::VAEW:S
Hut1250         A:S:A:F:NLSVG::L::M:::TAA:T:::V::V::G:TDAIGTYPN::D::V:F::L::
rrnAC3524       TL:GRSEGQ:::GQV::::::A:T:V:AV::L:T:V::::::::Y:::D::L:::M:::G
Hmu0992         SLV:VAT::::F:WI::A:F:::LASS:::VGF:A::::::::::G::::::::::::::

consensus       DLIPLA
#oth            312224
Hmu0416         R:V:IL
Hut1647         T:::VF
Hut1250         :AVT::
rrnAC3524       E:LS:Y
Hmu0992         :A:::R