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3 genomes BUD2506 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

rrnAC3525

- -

Hmu0415

Hmu0993

Hut1251

Hut1646

- - -

Pairwise sequence scores
Consensus score1164 Hmu0415 Hut1646 Hut1251 Hmu0993 rrnAC3525
568Hmu0415 1178 424 276 299 210
566Hut1646 424 1254 270 283 209
586Hut1251 276 270 1189 444 346
710Hmu0993 299 283 444 1169 453
552rrnAC3525 210 209 346 453 1173

175 symbols
consensus       ---------MDRARAVVRLVVAVVVVTLLLSGPLVGAVDLTAAPET---PALGDGNATVS
#oth            1111111111244233343322212122121..111412222432311132313.32312
Hmu0415         ::::::::::VSVARLE::A::::A:::::T::F-:V::A::RNP::::-TV:::R:NAT
Hut1646         MSRAFDSFFG:PLGLSQQ:L:G::::::VF:::::PGLSFGG:GPP:::ATI:::::S::
Hut1251         :::::::::::GS:VA:VASLT:I:GISV:::::::-::F::S:AASVG:D::E:AIDAT
Hmu0993         :::::::::::VD::::WG::GL::::T:V:::::::::::SDA:::::::Y:V:SV::E
rrnAC3525       ::::::::::E:::::ITS:I:IILGVT:::::::PS:T:ASE::S:::V::ES::V:::

consensus       SEALP-DAVTIEKGRFGADVYYLRIPDARISVAAVEGRPRLVYRLEVPELGLTRSTTRFL
#oth            2242122333213.21.12322.32.1122323222.2.22..21312.1121122121.
Hmu0415         V:R:DTS:LVV:G::::TG:D:::::::T:::SDI:::::::::VS:::::VD:T:::L:
Hut1646         :V:IDL:::E:TP::::T::E::::::::L:IDD:::E::I::::V::::Q:DHAE::L:
Hut1251         V:T::::TGSL:::G::::A:A:S::P:TLD:E::S:Q:LV::T:::::::::H:A:Y::
Hmu0993         :AS:::ERS:LTA:::::GE:R:QV:::AVA::::::::L:::K::IS:R:Y:::::H::
rrnAC3525       TVEM::EE::::::SY::AS:::DA:PV::HF:NLT:::T:::K:TIE:::Y::T:NH::

consensus       SASNGGSVALTMSDDTFAPDEINAAAYRGTLTVRVRSNESDRVVAERNIRIEVRR
#oth            24334221233331331322324344.2122312113433321123322211.22
Hmu0415         :GGQSET:R:G:R:RGLD::GVTEQR::A:I::::Q:F:Y:QT:F:ADETV:::P
Hut1646         ASP--:D:TVRP::VA:LSG:LS::H:N:::R:::Q:LST::T:FNES:::::::
Hut1251         :P::T:::TM:IDSHSL:::R:G:DS:::V:D:S::IG::V::LDRH:VS:::V:
Hmu0993         ::E:V::Y:AS:::::::::TV:QT::D:R:SLV::A:D:S::::::S::V::IE
rrnAC3525       DD:A:DTY:::LAS:::TDE::EREQ:N::V::SK:DEAGHG:::T:::T:S:VE