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3 genomes BUD2512 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi
-

pNG7220

rrnAC2813

- -

Hmu1835

Hut1160

- - -

Pairwise sequence scores
Consensus score292 rrnAC2813 Hut1160 pNG7220 Hmu1835
174rrnAC2813 421 123 132 135
196Hut1160 123 268 162 158
225pNG7220 132 162 303 219
226Hmu1835 135 158 219 302

55 symbols
consensus       MD--QHISESEMERISEFASTPKYERRPEQLLPDEATDD-E--------------
#oth            .111311122111..21..22.3.2.3.12...1322112111111111111111
rrnAC2813       ::::G::TPE:W:::EA::QK:S:L::::H:::E:::EGD:SVTEQWQATNRDVS
Hut1160         ::::SSLT::D:Q:::::::M:::::D::M:::E--S:::-::::::::::::::
pNG7220         :P::E:::D:::::::::::::M:K:S:D:::::G:A::E:::::::::::::::
Hmu1835         :PMV:::::R:::::T:::E::V:::T:::::::SS::::-::::::::::::::