3 genomes BUD2519 4 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC0586 rrnAC1057 - - Hmu2829 Hut2067 - - -

Pairwise sequence scores
Consensus score	1000	rrnAC1057	Hut2067	rrnAC0586	Hmu2829
474	rrnAC1057	1003	372	264	364
755	Hut2067	372	1037	390	605
522	rrnAC0586	264	390	614	482
797	Hmu2829	364	605	482	1007

136 symbols
consensus       MIVLDRDVLAKIA-RDPNEAVLNHLQQYRTEEWTIPAHVAWESLQAGSTRAEMLQEQRHL
#oth            11211222231312222212223213222222121223122123333222221122132.
rrnAC1057       ::L::NNIIR:Y:HP::D:::::Y:SEH:::P:G:S:I:LF:F:SFYD:Q:KQRKRRSQ:
Hut2067         :::::::::::::G::::::I:S::G:::R:::::::V:::::YK:::G:T:::RT::V:
rrnAC0586       -------------:--------------------------------------:::::Q::
Hmu2829         :::::::::V:L-::NS::T:VQ:::::S:R:::::S::::::F:YH::::::::::H::

consensus       RSAFDRILSFTADTALEAAYLDEKLQAQGVTLDAADLLNLATAHAAGGTFVTHNKNDFDK
#oth            2232.1112.13.1.1...12122.211112..31...11...132111.1.1121....
rrnAC1057       TQ:V:TVI::DG:::A:::SMETS:E:A::S::DV:::IA:::RQHQA::::AD::::::
Hut2067         DEQ:::V:D::D:C:::::::::Q:R:::IR::P::::::::::::::::::::AT::::
rrnAC0586       ::SL::::P::S::::::::::::::S::::::S::::::::::TE::::I:::::::::
Hmu2829         ::N:::::::::::::::::I:Q:::S:D:::::V:::::::::E:::M:::::R:::::

consensus       EPLHELVDVDVVRAA-
#oth            2.232.2.2.1.3131
rrnAC1057       T:V:::::I:I:D:S:
Hut2067         P::YD:::L:::M:DS
rrnAC0586       :::L::T:::::HT::
Hmu2829         ::ITQ:A::::::TE: