3 genomes BUD2526 3 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi - rrnAC3460 - - Hmu2484 Hut1125 - - -

Pairwise sequence scores
Consensus score	1051	Hut1125	Hmu2484	rrnAC3460
780	Hut1125	1059	601	668
813	Hmu2484	601	1066	688
851	rrnAC3460	668	688	1043

146 symbols
consensus       --MYDDILLPTDGSSGTEETLAHATAIARDNDATLHGLYVVDRRRYLAADKAAQDEVRES
#oth            111.121.21....1..21.12..121.111...1.1...1...211...122..1.211
Hut1125         ::::ET::T::::::::SK::Q::::::E:::::I:::::L:::M:::::DD:::::M::
Hmu2484         MET:::::::::::K:::::VG::LTL::NH:::::V::::::::F:::::ET::D:I:A
rrnAC3460       :::::SV:VA:::::::T:::::::S::::::::::::::::::L:V:::::N:::::Q:

consensus       LREDGEVALDDIRVQAEDAGVAVETAMAEGIPHKTIQDYAEENDADVIVMGTHGRTGRDR
#oth            .212.11.1112212212...2.1.112.....11.22..112.2.111.....1.....
Hut1125         :QS:::Q::ARL:E:VQQ::::::::LQ:::::RG:LT::::I:::L:::::::::::::
Hmu2484         :::Q::::I::VT:T::::::T:::::E:::::::::K::TN::V::VT:::::Q:::::
rrnAC3460       :E:E:D::::::V:GG:E:::E:V:T::::::::::T:::::E:I:::::::::::::::

consensus       VANLGSVTERVIQNADVPVLVVNIE-
#oth            1.1.....1..222111..1..2..1
Hut1125         L:::::::Q:::E:::I::F::D::N
Hmu2484         ::T::::::::LKGV:::::::::::
rrnAC3460       :::::::::::V:S:P::::::H:::